RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 ENPP1P22413 925 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 FAUP35544 74 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 TSPAN5P62079 268 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 C3orf33Q6P1S2 294 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 ZNF704Q6ZNC4 412 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 UEVLDQ8IX04 471 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 OR8H3Q8N146 312 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 SPICQ8N5J4 248 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 OR10H5Q8NGA6 315 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 ADAT3Q96EY9 351 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 MED30Q96HR3 178 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 RBP7Q96R05 134 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 SOX7Q9BT81 388 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 SEC61A2Q9H9S3 476 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 SDHAF3Q9NRP4 125 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 TMA7Q9Y2S6 64 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 LHFPL6Q9Y693 200 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 IGLV3-32A0A0A0MS00 114 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 WIPF3A6NGB9 483 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 TRAF3IP2O43734 574 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 SLC22A5O76082 557 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 CFIP05156 583 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 PGA4P0DJD7 388 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 PGA3P0DJD8 388 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 MSX1P28360 303 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 MMP16P51512 607 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 SIGIRRQ6IA17 410 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 RNF144BQ7Z419 303 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 ADGRE4PQ86SQ3 457 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 NKD1Q969G9 470 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 SLC26A1Q9H2B4 701 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 PTGES2Q9H7Z7 377 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 TAS2R8Q9NYW2 309 aa16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 CHCHD2Q9Y6H1 151 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-210ENST00000464987 MASP2O00187 686 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 GABRA1P14867 456 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 LAP3P28838 519 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 CLRN1P58418 232 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 PCOLCEQ15113 449 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 TMEM244Q5VVB8 128 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 STEAP1BQ6NZ63 245 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 DEGS2Q6QHC5 323 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 GABRG1Q8N1C3 465 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 GALNT16Q8N428 558 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 ACBD4Q8NC06 268 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 OR52N4Q8NGI2 321 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 SLC22A8Q8TCC7 542 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 ELP5Q8TE02 316 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 CDX2Q99626 313 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 PBOV1Q9GZY1 135 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 CNTD2Q9H8S5 307 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 LOC390937A0A1W2PQ73 354 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 M0QYG6 137 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 UBCP0CG48 685 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 SLC2A1P11166 492 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 PMPCAQ10713 525 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 EXOSC2Q13868 293 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 TMEM176BQ3YBM2 270 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 ZNF813Q6ZN06 617 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 UXS1Q8NBZ7 420 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 OR6N1Q8NGY5 312 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 TINAGL1Q9GZM7 467 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 C1orf198Q9H425 327 aa16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 GPN1Q9HCN4 374 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 C19orf25Q9UFG5 118 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 GDF2Q9UK05 429 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-210ENST00000464987 MYO7BQ6PIF6 2116 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 OR2M5A3KFT3 312 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 SNRPGP15A8MWD9 76 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 GNALP38405 381 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 OR3A3P47888 321 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 H2BFSP57053 126 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 B3GNTL1Q67FW5 361 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 MUC20Q8N307 709 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 NOXO1Q8NFA2 376 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 OR1J2Q8NGS2 313 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 CMBLQ96DG6 245 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 TMEM235A6NFC5 223 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 LEUTXA8MZ59 168 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 NOS1APO75052 506 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 CCL4P13236 92 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 CXCL2P19875 107 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 GRK1Q15835 563 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 C1orf100Q5SVJ3 147 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 THEM4Q5T1C6 240 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 RTN4RL2Q86UN3 420 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 ELMOD2Q8IZ81 293 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 PAQR4Q8N4S7 273 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 B3GNT4Q9C0J1 378 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 B3GNT2Q9NY97 397 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 PRELID1Q9Y255 219 aa16.6■□□□□ 0.25
TSPAN4-210ENST00000464987 CELSR3Q9NYQ7 3312 aa16.59■□□□□ 0.25
TSPAN4-210ENST00000464987 ARPC4-TTLL3A0A0A6YYG9 625 aa16.59■□□□□ 0.25
TSPAN4-210ENST00000464987 LOC105371267A0A1B0GV96 52 aa16.59■□□□□ 0.25
TSPAN4-210ENST00000464987 MEGF11A6BM72 1044 aa16.59■□□□□ 0.25
TSPAN4-210ENST00000464987 SYT7O43581 403 aa16.59■□□□□ 0.25
TSPAN4-210ENST00000464987 LPLP06858 475 aa16.59■□□□□ 0.25
TSPAN4-210ENST00000464987 PRKXP51817 358 aa16.59■□□□□ 0.25
TSPAN4-210ENST00000464987 POU4F3Q15319 338 aa16.59■□□□□ 0.25
TSPAN4-210ENST00000464987 KLHL24Q6TFL4 600 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms