RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 ACTR1AP61163 376 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 NOGQ13253 232 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 HMGN3Q15651 99 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 CD226Q15762 336 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ACTBL2Q562R1 376 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 EIF5AL1Q6IS14 154 aaKnown RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 SLC35D2Q76EJ3 337 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 MAMDC2Q7Z304 686 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 JAGN1Q8N5M9 183 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 FRMD1Q8N878 549 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ACBD4Q8NC06 268 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ADAD2Q8NCV1 583 aaKnown RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 OR51A2Q8NGJ7 313 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 OR13C3Q8NGS6 347 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 OR52N5Q8NH56 324 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 OR14C36Q8NHC7 312 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 C16orf52Q8NHV5 167 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ZNF519Q8TB69 540 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 NANPQ8TBE9 248 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 C2CD4CQ8TF44 421 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 WNT2BQ93097 391 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 TCEAL3Q969E4 200 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 TAAR8Q969N4 342 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 WDR92Q96MX6 357 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 DGAT2Q96PD7 388 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 DEFB118Q96PH6 123 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 OR5B2Q96R09 309 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 CCDC3Q9BQI4 270 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ADAM19Q9H013 955 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 OR10A5Q9H207 317 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 TMEM231Q9H6L2 316 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 SEBOXQ9HB31 216 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 UBQLN4Q9NRR5 601 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 FBLN5Q9UBX5 448 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 PRODH2Q9UF12 536 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 GTF2A1LQ9UNN4 478 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 MRPS33Q9Y291 106 aaKnown RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 LRP12Q9Y561 859 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 TRAV36DV7A0A075B6V5 113 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 LOC107986453A0A1B0GWG9 222 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 DCDC2BA2VCK2 349 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 RNASEK-C17orf49H0YIS7 233 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 H0YIZ8 118 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ZNF264O43296 627 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 MBTPS2O43462 519 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SGCEO43556 437 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 FBXO24O75426 580 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 IL33O95760 270 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 IGHMP01871 453 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 HLA-DQA2P01906 255 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 IFNA6P05013 189 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SFTA3P0C7M3 94 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 AKR1C4P17516 323 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 NFYBP25208 207 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 HSD11B1P28845 292 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 GJA4P35212 333 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 HRH1P35367 487 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 PMELP40967 661 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SLC6A8P48029 635 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 CCR4P51679 360 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 RPL27P61353 136 aaKnown RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 HTRA3P83110 453 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 QRFPP83859 136 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SPOCK1Q08629 439 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 EIF2B1Q14232 305 aaKnown RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 NNATQ16517 81 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SGCAQ16586 387 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 TMEM244Q5VVB8 128 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 OR10K2Q6IF99 312 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ZNF585AQ6P3V2 769 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ZNF704Q6ZNC4 412 aaPredicted RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 ZFP82Q8N141 532 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ZNF615Q8N8J6 731 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 OR4D6Q8NGJ1 314 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 OR9A4Q8NGU2 314 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 OR10R2Q8NGX6 335 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 PHOSPHO1Q8TCT1 267 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SPPL3Q8TCT6 385 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 PPP1R14AQ96A00 147 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ELSPBP1Q96BH3 223 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 NKX3-1Q99801 234 aaPredicted RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 GAL3ST1Q99999 423 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 MICU1Q9BPX6 476 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ABHD6Q9BV23 337 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ZMAT3Q9HA38 289 aaKnown RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 FN3KRPQ9HA64 309 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 PDE7BQ9NP56 450 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 NOSIPQ9Y314 301 aaKnown RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 FAM96BQ9Y3D0 163 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 HTTP42858 3142 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 TRBV23OR9-2A0A075B6M9 112 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 C13orf42A0A1B0GVH6 325 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 FAM157AC9JC47 383 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SCDO00767 359 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 OR2T1O43869 369 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 FARS2O95363 451 aaKnown RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 SFT2D2O95562 160 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 APBB3O95704 486 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 MT-ATP6P00846 226 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 TIMP1P01033 207 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms