RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 H0YL77 283 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 J3QW42 95 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 IGHV1-69P01742 117 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 CTXN1P60606 82 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 FAM189A2Q15884 450 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 TNFAIP8L3Q5GJ75 292 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 INTS11Q5TA45 600 aaKnown RBP12.01□□□□□ -0.49
SMC1A-204ENST00000463684 METTL11BQ5VVY1 283 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 ZNF841Q6ZN19 808 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 Q6ZPA2 131 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 Q6ZSV7 163 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 MREGQ8N565 214 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 PNLDC1Q8NA58 520 aaKnown RBP12.01□□□□□ -0.49
SMC1A-204ENST00000463684 PCYOX1LQ8NBM8 494 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 OR11L1Q8NGX0 322 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 LRTOMTQ8WZ04 291 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 ZBTB9Q96C00 473 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 RASD2Q96D21 266 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 WDFY2Q96P53 400 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 TBX15Q96SF7 602 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 EMC7Q9NPA0 242 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 PTTG3PQ9NZH4 202 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 RIMS3Q9UJD0 308 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 HIF3AQ9Y2N7 669 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 SH3GLB1Q9Y371 365 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 USH1CQ9Y6N9 552 aa12.01□□□□□ -0.49
SMC1A-204ENST00000463684 TMEM120BA0PK00 339 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 F5H5P2 479 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 PRB2P02812 416 aaPredicted RBP12□□□□□ -0.49
SMC1A-204ENST00000463684 SCG5P05408 212 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 RGS6P49758 472 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 KCNJ8Q15842 424 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 AGKQ53H12 422 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 DLEU7Q6UYE1 221 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 FBXW12Q6X9E4 464 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 LDLRAD3Q86YD5 345 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 LHX4Q969G2 390 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 TAMM41Q96BW9 452 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 POLR2J2Q9GZM3 115 aaKnown RBP12□□□□□ -0.49
SMC1A-204ENST00000463684 POLR2J3Q9H1A7 115 aaKnown RBP12□□□□□ -0.49
SMC1A-204ENST00000463684 MMADHCQ9H3L0 296 aaPredicted RBP12□□□□□ -0.49
SMC1A-204ENST00000463684 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12□□□□□ -0.49
SMC1A-204ENST00000463684 TMEM100Q9NV29 134 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 FAM96BQ9Y3D0 163 aa12□□□□□ -0.49
SMC1A-204ENST00000463684 A0A0U1RQK1 487 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 BTBD17A6NE02 478 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 OR5F1O95221 314 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 MMP9P14780 707 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 FPR3P25089 353 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 PSMB10P40306 273 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 PMELP40967 661 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 MTPNP58546 118 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 KPRPQ5T749 579 aaPredicted RBP11.99□□□□□ -0.49
SMC1A-204ENST00000463684 DHRS7BQ6IAN0 325 aaPredicted RBP11.99□□□□□ -0.49
SMC1A-204ENST00000463684 CROCCP2Q86T23 111 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 IGFN1Q86VF2 1251 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 BHLHE23Q8NDY6 225 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 SLC7A6Q92536 515 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 ERGIC1Q969X5 290 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 NKIRAS1Q9NYS0 192 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 NBEAL2Q6ZNJ1 2754 aa11.99□□□□□ -0.49
SMC1A-204ENST00000463684 ZNF816-ZNF321PA0A0X1KG74 233 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 HTR3EA5X5Y0 456 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 FBP2O00757 339 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 MLNRO43193 412 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 OPN1MWP04001 364 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 OPN1MW2P0DN77 364 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 OPN1MW3P0DN78 364 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 AQP6Q13520 282 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 PIN1Q13526 163 aaPredicted RBP11.98□□□□□ -0.49
SMC1A-204ENST00000463684 SAMD5Q5TGI4 173 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 WDR93Q6P2C0 686 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 Q6ZTK2 550 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 C19orf18Q8NEA5 215 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 OR1F12Q8NHA8 337 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 MRAPQ8TCY5 172 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 APOBEC3DQ96AK3 386 aaPredicted RBP11.98□□□□□ -0.49
SMC1A-204ENST00000463684 BPIFA2Q96DR5 249 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 BAG5Q9UL15 447 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 TMCC3Q9ULS5 477 aa11.98□□□□□ -0.49
SMC1A-204ENST00000463684 CAB39Q9Y376 341 aaPredicted RBP11.98□□□□□ -0.49
SMC1A-204ENST00000463684 ELOVL7A1L3X0 281 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 IQCF6A8MYZ5 107 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 H7C1C5 153 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 TSPAN9O75954 239 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 HLA-DPB1P04440 258 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 IFI30P13284 250 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 TGFBR2P37173 567 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 GATA4P43694 442 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 IDH3AP50213 366 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 ARF6P62330 175 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 LCN6P62502 163 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 EGR3Q06889 387 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 SELPLGQ14242 412 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 DHDDSQ86SQ9 333 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 CELF2-AS1Q8N7Q2 184 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 OR51A7Q8NH64 312 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 Q8TCH9 128 aa11.97□□□□□ -0.49
SMC1A-204ENST00000463684 LRRC8CQ8TDW0 803 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms