RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ZNF703Q9H7S9 590 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-213ENST00000462730 BRD7Q9NPI1 651 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 CYSLTR2Q9NS75 346 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 ING3Q9NXR8 418 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 ABRACLQ9P1F3 81 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 CYB5R1Q9UHQ9 305 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 EMC9Q9Y3B6 208 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 A0A0G2JMP0 313 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 LOC105371267A0A1B0GV96 52 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 SMAD9O15198 467 aaKnown RBP12.83□□□□□ -0.35
HDAC6-213ENST00000462730 DNPH1O43598 174 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 ORC5O43913 435 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 SLC43A1O75387 559 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 SRSF10O75494 262 aaKnown RBP12.83□□□□□ -0.35
HDAC6-213ENST00000462730 ARSBP15848 533 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 POU3F2P20265 443 aaPredicted RBP12.83□□□□□ -0.35
HDAC6-213ENST00000462730 NPR2P20594 1047 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 ENPP1P22413 925 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 TALDO1P37837 337 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 HTR2BP41595 481 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 INPP1P49441 399 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 STARP49675 285 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 RRAS2P62070 204 aaPredicted RBP12.83□□□□□ -0.35
HDAC6-213ENST00000462730 CTAG1AP78358 180 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 RSPO4Q2I0M5 234 aaPredicted RBP12.83□□□□□ -0.35
HDAC6-213ENST00000462730 HES5Q5TA89 166 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 FAM109AQ8N4B1 249 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 DTX3Q8N9I9 347 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 MDS2Q8NDY4 140 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 OR6N1Q8NGY5 312 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF671Q8TAW3 534 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 RNF133Q8WVZ7 376 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 SLAMF6Q96DU3 332 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF385AQ96PM9 386 aaKnown RBP12.83□□□□□ -0.35
HDAC6-213ENST00000462730 OR2M2Q96R28 347 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF552Q9H707 407 aaPredicted RBP12.83□□□□□ -0.35
HDAC6-213ENST00000462730 MCUBQ9NWR8 336 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 GLTPQ9NZD2 209 aa12.83□□□□□ -0.35
HDAC6-213ENST00000462730 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 NR2C1P13056 603 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 CARD18P57730 90 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 RAC3P60763 192 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 LRFN4Q6PJG9 635 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 DEGS2Q6QHC5 323 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 STAC2Q6ZMT1 411 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 GALNTL5Q7Z4T8 443 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-213ENST00000462730 OR2V1Q8NHB1 315 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 TMEM106AQ96A25 262 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 TTTY12Q9BZ98 90 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 B4GALT7Q9UBV7 327 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 KLK13Q9UKR3 277 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 CLEC4AQ9UMR7 237 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 LHFPL6Q9Y693 200 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 V9GY05 133 aa12.83□□□□□ -0.36
HDAC6-213ENST00000462730 KIAA1549Q9HCM3 1950 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 A0A0X1KG70 313 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 CXCL13O43927 109 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 NME2P1O60361 137 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 RAF1P04049 648 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 NME2P22392 152 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 SUCLG1P53597 346 aaKnown RBP12.82□□□□□ -0.36
HDAC6-213ENST00000462730 AP2S1P53680 142 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-213ENST00000462730 ARG2P78540 354 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 IKZF1Q13422 519 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 ESPNLQ6ZVH7 1005 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 LRRTM1Q86UE6 522 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 OR4M2Q8NGB6 313 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 OR2AJ1Q8NGZ0 328 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 LGALS14Q8TCE9 139 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 DEDD2Q8WXF8 326 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 THRSPQ92748 146 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 TMEM54Q969K7 222 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 ADGRG7Q96K78 797 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 C1orf198Q9H425 327 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 PTTG3PQ9NZH4 202 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 GDF2Q9UK05 429 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-213ENST00000462730 OR52A1Q9UKL2 312 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 KLF13Q9Y2Y9 288 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-213ENST00000462730 CFAP47Q6ZTR5 3102 aa12.82□□□□□ -0.36
HDAC6-213ENST00000462730 TRAV8-7A0A075B6U6 113 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 A0A1B0GVC2 190 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 A6NIN4 97 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 IFITM5A6NNB3 132 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF891A8MT65 544 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-213ENST00000462730 AIPO00170 330 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 SP1P08047 785 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 ADRA2CP18825 462 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 PHYHD1Q5SRE7 291 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF57Q68EA5 555 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-213ENST00000462730 SLC25A25Q6KCM7 469 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 CFAP77Q6ZQR2 320 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 TMEM123Q8N131 208 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 ZIC4Q8N9L1 334 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 FDCSPQ8NFU4 85 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 OR10S1Q8NGN2 331 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 OR10D3Q8NH80 312 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 CREB3L1Q96BA8 519 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 WACQ9BTA9 647 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms