RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 LIPT2A6NK58 231 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 LDLRAD4O15165 306 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 PMS2P2O95744 297 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 ZNF41P51814 821 aaPredicted RBP15.1■□□□□ 0.01
ACTB-207ENST00000462494 ZNF574Q6ZN55 896 aaPredicted RBP15.1■□□□□ 0.01
ACTB-207ENST00000462494 C17orf107Q6ZR85 190 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 CD163Q86VB7 1156 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 ZNF584Q8IVC4 421 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 NKAIN3Q8N8D7 197 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 CHST4Q8NCG5 386 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 RNF133Q8WVZ7 376 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 RBPMSQ93062 196 aaKnown RBP15.1■□□□□ 0.01
ACTB-207ENST00000462494 CMBLQ96DG6 245 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 SERINC1Q9NRX5 453 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 GDF2Q9UK05 429 aaPredicted RBP15.1■□□□□ 0.01
ACTB-207ENST00000462494 CFAP54Q96N23 3096 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 OR6C65A6NJZ3 312 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 ZNF208O43345 1280 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 SYT7O43581 403 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 LIPCP11150 499 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 BDKRB2P30411 391 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 NR0B2Q15466 257 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 C1orf100Q5SVJ3 147 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 DEGS2Q6QHC5 323 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 GPAT4Q86UL3 456 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 C12orf45Q8N5I9 185 aaPredicted RBP15.09■□□□□ 0.01
ACTB-207ENST00000462494 OR52N4Q8NGI2 321 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 OR1J2Q8NGS2 313 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 CXorf58Q96LI9 332 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 SLC25A21Q9BQT8 299 aaPredicted RBP15.09■□□□□ 0.01
ACTB-207ENST00000462494 SLCO5A1Q9H2Y9 848 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 PTGES2Q9H7Z7 377 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 SEC61A2Q9H9S3 476 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 FAM206AQ9NX38 181 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 FBXO4Q9UKT5 387 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 TEX51A0A1B0GUA7 166 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 METTL21EPA6NDL7 271 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 TMEM200CA6NKL6 621 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 EFNA2O43921 213 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 FOSL2P15408 326 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 PPP3CBP16298 524 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 MMP16P51512 607 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 SUMO3P55854 103 aaPredicted RBP15.09■□□□□ 0.01
ACTB-207ENST00000462494 MYBPHQ13203 477 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 INPP5JQ15735 1006 aaPredicted RBP15.09■□□□□ 0.01
ACTB-207ENST00000462494 CDNFQ49AH0 187 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 GSG1LQ6UXU4 331 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 RABEPKQ7Z6M1 372 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 NUBPLQ8TB37 319 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 SLC6A7Q99884 636 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 PBOV1Q9GZY1 135 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 ALX4Q9H161 411 aaPredicted RBP15.09■□□□□ 0.01
ACTB-207ENST00000462494 C1orf198Q9H425 327 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 METTL7AQ9H8H3 244 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 ALKBH4Q9NXW9 302 aa15.09■□□□□ 0.01
ACTB-207ENST00000462494 LOC390937A0A1W2PQ73 354 aa15.08■□□□□ 0
ACTB-207ENST00000462494 hCG_1807616A0A1W2PRN6 198 aa15.08■□□□□ 0
ACTB-207ENST00000462494 TUBAL3A6NHL2 446 aa15.08■□□□□ 0
ACTB-207ENST00000462494 SCRG1O75711 98 aa15.08■□□□□ 0
ACTB-207ENST00000462494 TTRP02766 147 aa15.08■□□□□ 0
ACTB-207ENST00000462494 CD37P11049 281 aa15.08■□□□□ 0
ACTB-207ENST00000462494 EMP2P54851 167 aa15.08■□□□□ 0
ACTB-207ENST00000462494 MPPED2Q15777 294 aa15.08■□□□□ 0
ACTB-207ENST00000462494 ATPAF1Q5TC12 328 aaPredicted RBP15.08■□□□□ 0
ACTB-207ENST00000462494 CARD17Q5XLA6 110 aa15.08■□□□□ 0
ACTB-207ENST00000462494 TMEM71Q6P5X7 295 aa15.08■□□□□ 0
ACTB-207ENST00000462494 ZNF813Q6ZN06 617 aa15.08■□□□□ 0
ACTB-207ENST00000462494 STEAP2Q8NFT2 490 aa15.08■□□□□ 0
ACTB-207ENST00000462494 FOXRED1Q96CU9 486 aaPredicted RBP15.08■□□□□ 0
ACTB-207ENST00000462494 ADAT3Q96EY9 351 aaPredicted RBP15.08■□□□□ 0
ACTB-207ENST00000462494 ZNF230Q9UIE0 474 aaPredicted RBP15.08■□□□□ 0
ACTB-207ENST00000462494 NUP50Q9UKX7 468 aa15.08■□□□□ 0
ACTB-207ENST00000462494 B3GALT5Q9Y2C3 310 aa15.08■□□□□ 0
ACTB-207ENST00000462494 POLR1DQ9Y2S0 133 aa15.08■□□□□ 0
ACTB-207ENST00000462494 ASCC3Q8N3C0 2202 aaKnown RBP15.08■□□□□ 0
ACTB-207ENST00000462494 WDFY3Q8IZQ1 3526 aa15.08■□□□□ 0
ACTB-207ENST00000462494 A0A0A6YYH2 397 aa15.08■□□□□ 0
ACTB-207ENST00000462494 A6NJ64 397 aa15.08■□□□□ 0
ACTB-207ENST00000462494 H3BUI4 141 aa15.08■□□□□ 0
ACTB-207ENST00000462494 ZNF735P0CB33 412 aa15.08■□□□□ 0
ACTB-207ENST00000462494 CLRN1P58418 232 aa15.08■□□□□ 0
ACTB-207ENST00000462494 FOXK1P85037 733 aa15.08■□□□□ 0
ACTB-207ENST00000462494 TMEM65Q6PI78 240 aa15.08■□□□□ 0
ACTB-207ENST00000462494 TRAPPC6BQ86SZ2 158 aa15.08■□□□□ 0
ACTB-207ENST00000462494 FJX1Q86VR8 437 aa15.08■□□□□ 0
ACTB-207ENST00000462494 GVQW1Q8N7I0 195 aa15.08■□□□□ 0
ACTB-207ENST00000462494 OR10G3Q8NGC4 313 aa15.08■□□□□ 0
ACTB-207ENST00000462494 DNASE2BQ8WZ79 361 aa15.08■□□□□ 0
ACTB-207ENST00000462494 MFFQ9GZY8 342 aa15.08■□□□□ 0
ACTB-207ENST00000462494 UBE2ZQ9H832 354 aaPredicted RBP15.08■□□□□ 0
ACTB-207ENST00000462494 SDHAF2Q9NX18 166 aa15.08■□□□□ 0
ACTB-207ENST00000462494 CYB5R1Q9UHQ9 305 aa15.08■□□□□ 0
ACTB-207ENST00000462494 RAB22AQ9UL26 194 aa15.08■□□□□ 0
ACTB-207ENST00000462494 IGLV3-12A0A075B6K2 115 aa15.07■□□□□ 0
ACTB-207ENST00000462494 OR2J2O76002 312 aa15.07■□□□□ 0
ACTB-207ENST00000462494 NAGAP17050 411 aa15.07■□□□□ 0
ACTB-207ENST00000462494 ACY1Q03154 408 aa15.07■□□□□ 0
ACTB-207ENST00000462494 GK2Q14410 553 aaPredicted RBP15.07■□□□□ 0
ACTB-207ENST00000462494 HDDC2Q7Z4H3 204 aa15.07■□□□□ 0
ACTB-207ENST00000462494 COMMD2Q86X83 199 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms