RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 PTTG3PQ9NZH4 202 aa12.94□□□□□ -0.34
SKA3-204ENST00000462482 MIOXQ9UGB7 285 aa12.94□□□□□ -0.34
SKA3-204ENST00000462482 AURKCQ9UQB9 309 aa12.94□□□□□ -0.34
SKA3-204ENST00000462482 COA3Q9Y2R0 106 aaPredicted RBP12.94□□□□□ -0.34
SKA3-204ENST00000462482 F5H0A9 414 aaPredicted RBP12.93□□□□□ -0.34
SKA3-204ENST00000462482 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 FFAR1O14842 300 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 TMPRSS2O15393 492 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 H1F0P07305 194 aaKnown RBP12.93□□□□□ -0.34
SKA3-204ENST00000462482 SELEP16581 610 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 CRABP1P29762 137 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 RPS6KA3P51812 740 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 GNB2P62879 340 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 PRR31Q5SQ13 230 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 OR2T2Q6IF00 324 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 FBXW12Q6X9E4 464 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 SLC15A3Q8IY34 581 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 GJC3Q8NFK1 279 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 OR10AD1Q8NGE0 317 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 SLC7A6Q92536 515 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 FAM46AQ96IP4 442 aaKnown RBP12.93□□□□□ -0.34
SKA3-204ENST00000462482 MEGF10Q96KG7 1140 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 SIGLEC11Q96RL6 698 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 HCAR1Q9BXC0 346 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 HDHD2Q9H0R4 259 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 ZNF696Q9H7X3 374 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 RPS6KA6Q9UK32 745 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 ENPP4Q9Y6X5 453 aa12.93□□□□□ -0.34
SKA3-204ENST00000462482 POM121CA8CG34 1229 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 SOCS2O14508 198 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 RER1O15258 196 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 GMNNO75496 209 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 RNASE1P07998 156 aaKnown RBP12.92□□□□□ -0.34
SKA3-204ENST00000462482 WNT2P09544 360 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 PPIAL4GP0DN37 164 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 FUT4P22083 530 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 SLC7A2P52569 658 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 PAX8Q06710 450 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 HNRNPA0Q13151 305 aaKnown RBP12.92□□□□□ -0.34
SKA3-204ENST00000462482 HLXQ14774 488 aaPredicted RBP12.92□□□□□ -0.34
SKA3-204ENST00000462482 KRT72Q14CN4 511 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 KLF17Q5JT82 389 aaPredicted RBP12.92□□□□□ -0.34
SKA3-204ENST00000462482 FAM122BQ7Z309 247 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.92□□□□□ -0.34
SKA3-204ENST00000462482 KLBQ86Z14 1044 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 PARP8Q8N3A8 854 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 POU5F2Q8N7G0 328 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 OR8B3Q8NGG8 313 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 NEIL1Q96FI4 390 aaPredicted RBP12.92□□□□□ -0.34
SKA3-204ENST00000462482 RSRC1Q96IZ7 334 aaKnown RBP12.92□□□□□ -0.34
SKA3-204ENST00000462482 OR8B2Q96RD0 313 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 COQ7Q99807 217 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 NUAK2Q9H093 628 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 NRIP3Q9NQ35 241 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 VSX1Q9NZR4 365 aaPredicted RBP12.92□□□□□ -0.34
SKA3-204ENST00000462482 ARMCX1Q9P291 453 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 IER3IP1Q9Y5U9 82 aa12.92□□□□□ -0.34
SKA3-204ENST00000462482 TENM1Q9UKZ4 2725 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 A0A1W2PRQ8 180 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 CLDN34H7C241 214 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 CYB5R3P00387 301 aaPredicted RBP12.91□□□□□ -0.34
SKA3-204ENST00000462482 DBHP09172 617 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 CD80P33681 288 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 ERFP50548 548 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 MALLQ13021 153 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 DGCR6Q14129 220 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 CCDC92Q53HC0 331 aaPredicted RBP12.91□□□□□ -0.34
SKA3-204ENST00000462482 DPY19L2P2Q6ZN68 376 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 MOGAT3Q86VF5 341 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 JAZF1Q86VZ6 243 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 BCL6BQ8N143 479 aaPredicted RBP12.91□□□□□ -0.34
SKA3-204ENST00000462482 OR11L1Q8NGX0 322 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 ZNF420Q8TAQ5 688 aaPredicted RBP12.91□□□□□ -0.34
SKA3-204ENST00000462482 SLC7A13Q8TCU3 470 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 RAB40AQ8WXH6 277 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 ZDHHC16Q969W1 377 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 GPX7Q96SL4 187 aaPredicted RBP12.91□□□□□ -0.34
SKA3-204ENST00000462482 KCTD14Q9BQ13 255 aaPredicted RBP12.91□□□□□ -0.34
SKA3-204ENST00000462482 C1QTNF5Q9BXJ0 243 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 UNKLQ9H9P5 680 aaKnown RBP12.91□□□□□ -0.34
SKA3-204ENST00000462482 EFCAB1Q9HAE3 211 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 TMEM165Q9HC07 324 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 TMEM100Q9NV29 134 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 KIF17Q9P2E2 1029 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 SIGLEC7Q9Y286 467 aa12.91□□□□□ -0.34
SKA3-204ENST00000462482 IGHV3OR16-10A0A075B7F0 116 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 IGHV2-70DA0A0C4DH43 119 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 UNC119BA6NIH7 251 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 CCDC22O60826 627 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 PTP4A3O75365 173 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 ZNF205O95201 554 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 GPANK1O95872 356 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 RENP00797 406 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 COX4I1P13073 169 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 FPR3P25089 353 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 PITPNBP48739 271 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 GSK3BP49841 420 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 ECH1Q13011 328 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 KCNMB1Q16558 191 aa12.9□□□□□ -0.34
SKA3-204ENST00000462482 ZNF181Q2M3W8 571 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms