RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 Q6ZPA2 131 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 DNM1P46Q6ZS02 220 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 COLCA1Q6ZS62 124 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 RHOUQ7L0Q8 258 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 AMIGO2Q86SJ2 522 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 ZNF575Q86XF7 245 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 UBE2J2Q8N2K1 259 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 SYT14Q8NB59 555 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 SLC37A3Q8NCC5 494 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 IL17RDQ8NFM7 739 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 OR6N1Q8NGY5 312 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 ZNRF4Q8WWF5 429 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 MUCL1Q96DR8 90 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 FBXO17Q96EF6 278 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 POM121L2Q96KW2 1035 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 SLC38A2Q96QD8 506 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 RBP7Q96R05 134 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 NMNAT3Q96T66 252 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 GPHA2Q96T91 129 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 PITX2Q99697 317 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 ZNF416Q9BWM5 594 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 NUAK2Q9H093 628 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 SYT4Q9H2B2 425 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 FN3KQ9H479 309 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 ESRP2Q9H6T0 727 aaKnown RBP4.95□□□□□ -1.62
VPS36-202ENST00000462289 ZNF442Q9H7R0 627 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 NGBQ9NPG2 151 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 PNRC2Q9NPJ4 139 aaKnown RBP4.95□□□□□ -1.62
VPS36-202ENST00000462289 DDX28Q9NUL7 540 aaKnown RBP4.95□□□□□ -1.62
VPS36-202ENST00000462289 ZNF701Q9NV72 531 aaPredicted RBP4.95□□□□□ -1.62
VPS36-202ENST00000462289 MRPL22Q9NWU5 206 aaKnown RBP4.95□□□□□ -1.62
VPS36-202ENST00000462289 IL20RAQ9UHF4 553 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 CYB5R1Q9UHQ9 305 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 KCNG2Q9UJ96 466 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 B9D1Q9UPM9 204 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 POFUT2Q9Y2G5 429 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 LHFPL6Q9Y693 200 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 CSPG4Q6UVK1 2322 aa4.95□□□□□ -1.62
VPS36-202ENST00000462289 CR1P17927 2039 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CIB4A0PJX0 185 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 G3V2T6 193 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 SOCS2O14508 198 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 HS3ST1O14792 307 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 ARHGEF9O43307 516 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 SYNGR3O43761 229 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 SOX14O95416 240 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 PLAUP00749 431 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CD8AP01732 235 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 HLA-HP01893 362 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 PSKH1P11801 424 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 GABRB1P18505 474 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 LAP3P28838 519 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 PCSK6P29122 969 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CRABP1P29762 137 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CALCRP30988 508 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CDAP32320 146 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 RPL4P36578 427 aaKnown RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 CENPAP49450 140 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 EVX1P49640 407 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 ERFP50548 548 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 ZNF84P51523 738 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CRISP1P54107 249 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CLRN1P58418 232 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 PSG4Q00888 419 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 HSF2Q03933 536 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS36-202ENST00000462289 AQP6Q13520 282 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 DAG1Q14118 895 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CRMP1Q14194 572 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 GGTLC2Q14390 218 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 PTGES3Q15185 160 aaKnown RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 EFNB3Q15768 340 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 GSG1Q2KHT4 349 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 MST1LQ2TV78 715 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 AADACL4Q5VUY2 407 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CARD17Q5XLA6 110 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 ZNF544Q6NX49 715 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 TMEM108Q6UXF1 575 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 ZNF704Q6ZNC4 412 aaPredicted RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 KRT74Q7RTS7 529 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 MDP1Q86V88 176 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 GLB1L2Q8IW92 636 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 TIGD4Q8IY51 512 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CPEB3Q8NE35 698 aaKnown RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 OR52L1Q8NGH7 329 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 OR5AN1Q8NGI8 311 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 OR4K13Q8NH42 304 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 OR52N5Q8NH56 324 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 TMEM171Q8WVE6 324 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 RDH12Q96NR8 316 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 TSSK2Q96PF2 358 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 ERMAPQ96PL5 475 aaPredicted RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 SLC29A1Q99808 456 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 CIB1Q99828 191 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 RBM4BQ9BQ04 359 aaKnown RBP4.94□□□□□ -1.62
VPS36-202ENST00000462289 IFT27Q9BW83 186 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 TSSK6Q9BXA6 273 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 HCAR1Q9BXC0 346 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 OR2H1Q9GZK4 316 aa4.94□□□□□ -1.62
VPS36-202ENST00000462289 WNT5BQ9H1J7 359 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms