RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 ANKRD60Q9BZ19 345 aa8.2□□□□□ -1.1
DDX39B-215ENST00000462256 TINAGL1Q9GZM7 467 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-215ENST00000462256 NELFAQ9H3P2 528 aa8.2□□□□□ -1.1
DDX39B-215ENST00000462256 SAV1Q9H4B6 383 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-215ENST00000462256 AKIP1Q9NQ31 210 aa8.2□□□□□ -1.1
DDX39B-215ENST00000462256 A0A0G2JNJ9 132 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 A8MV72 311 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 GRPP07492 148 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 APEX1P27695 318 aaKnown RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 AQP6Q13520 282 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 PLCXD3Q63HM9 321 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 PGBD2Q6P3X8 592 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 CDH24Q86UP0 819 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 OR6S1Q8NH40 331 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TRIM63Q969Q1 353 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 APOBEC3DQ96AK3 386 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 SRXN1Q9BYN0 137 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 WDR12Q9GZL7 423 aaKnown RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 Q9UFV3 132 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 KCNG2Q9UJ96 466 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 DHDHQ9UQ10 334 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 GUSBP08236 651 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 PATE4P0C8F1 98 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 PRF1P14222 555 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 HTR2AP28223 471 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 SRP9P49458 86 aaKnown RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 LHFPL3Q86UP9 236 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 OR6V1Q8N148 313 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 PERPQ96FX8 193 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 SYT3Q9BQG1 590 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 DGCR6LQ9BY27 220 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 PRDM14Q9GZV8 571 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TAAR3PQ9P1P4 343 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 B3GAT1Q9P2W7 334 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 LOC100506127A0A0U1RQW1 187 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF878C9JN71 531 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TERTO14746 1132 aaKnown RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 SLC2A1P11166 492 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 SPNP16150 400 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 HIST1H1CP16403 213 aaKnown RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 SHC1P29353 583 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TAS2R43P59537 309 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 DBPQ10586 325 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF124Q15973 351 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TSTQ16762 297 aaKnown RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF620Q6ZNG0 422 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TMPRSS11FQ6ZWK6 438 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 MOB3CQ70IA8 216 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 HS3ST5Q8IZT8 346 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 WACQ9BTA9 647 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 FN3KQ9H479 309 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF221Q9UK13 617 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 FZR1Q9UM11 496 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 MITFO75030 526 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 UPK3AO75631 287 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TMEM225BP0DP42 221 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 CD8BP10966 210 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 STOMP27105 288 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 POLR2IP36954 125 aaKnown RBP8.19□□□□□ -1.1
DDX39B-215ENST00000462256 CXCR4P61073 352 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 SEC23BQ15437 767 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 ATAD3CQ5T2N8 411 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TMEM244Q5VVB8 128 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 ZNF787Q6DD87 383 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TRAPPC6BQ86SZ2 158 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 MKXQ8IYA7 352 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 ARHGEF39Q8N4T4 335 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 RNF128Q8TEB7 428 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 NPRL2Q8WTW4 380 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 CCL17Q92583 94 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 TSSK2Q96PF2 358 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 ADAM19Q9H013 955 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 SSR3Q9UNL2 185 aa8.19□□□□□ -1.1
DDX39B-215ENST00000462256 hCG_1809904A0A1W2PP81 198 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 A0A1W2PPE2 198 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 A0A1W2PR64 198 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 A0A1W2PRV1 198 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 SHOXO15266 292 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 TNRC18O15417 2968 aaPredicted RBP8.18□□□□□ -1.1
DDX39B-215ENST00000462256 RGS5O15539 181 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 MYF6P23409 242 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 TALDO1P37837 337 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 SNU13P55769 128 aaKnown RBP8.18□□□□□ -1.1
DDX39B-215ENST00000462256 Q5BKY6 102 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 PHC2Q8IXK0 858 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 SLC22A24Q8N4F4 322 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 CHST4Q8NCG5 386 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 TRMT10AQ8TBZ6 339 aaKnown RBP8.18□□□□□ -1.1
DDX39B-215ENST00000462256 LIPHQ8WWY8 451 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 ELMOD3Q96FG2 381 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 MED20Q9H944 212 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 WDR76Q9H967 626 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 ABCB10Q9NRK6 738 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 A4GNTQ9UNA3 340 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 EXOSC1Q9Y3B2 195 aaKnown RBP8.18□□□□□ -1.1
DDX39B-215ENST00000462256 BTBD17A6NE02 478 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 NKX6-3A6NJ46 265 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 SMAD7O15105 426 aaKnown RBP8.18□□□□□ -1.1
DDX39B-215ENST00000462256 MAKP20794 623 aa8.18□□□□□ -1.1
DDX39B-215ENST00000462256 MAPK3P27361 379 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms