RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 MRPL43Q8N983 215 aaKnown RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 OLIG1Q8TAK6 271 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 EDARADDQ8WWZ3 215 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 SLAMF6Q96DU3 332 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 NOL4LQ96MY1 436 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 NIPSNAP1Q9BPW8 284 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 IER2Q9BTL4 223 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 HS3ST2Q9Y278 367 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 LMO7Q8WWI1 1683 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 PTBP3O95758 552 aaKnown RBP8.21□□□□□ -1.09
BRCA1-205ENST00000461221 MOGAT2Q3SYC2 334 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 ABHD17CQ6PCB6 329 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 Q6ZNX1 250 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 PRSS45Q7RTY3 260 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 OR5AP2Q8NGF4 316 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 OR52I2Q8NH67 350 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 GPR119Q8TDV5 335 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 C2orf50Q96LR7 162 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 VAMP8Q9BV40 100 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 AQP8O94778 261 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 ACKR1Q16570 336 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM52BQ4KMG9 183 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 PET117Q6UWS5 81 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 C6orf15Q6UXA7 325 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-205ENST00000461221 ANKLE1Q8NAG6 615 aa8.21□□□□□ -1.09
BRCA1-205ENST00000461221 THOC3Q96J01 351 aaKnown RBP8.21□□□□□ -1.09
BRCA1-205ENST00000461221 KLF13Q9Y2Y9 288 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-205ENST00000461221 HSBP1O75506 76 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 TFAP2AP05549 437 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 SLC25A4P12235 298 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 G0S2P27469 103 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 MEOX1P50221 254 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 PPP1CBP62140 327 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 EGR3Q06889 387 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 FAM71E1Q6IPT2 247 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 DHRS11Q6UWP2 260 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 OR51E1Q8TCB6 317 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 TMED6Q8WW62 240 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 Q96M85 177 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 AAMDCQ9H7C9 122 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 DUSP22Q9NRW4 184 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 DHCR7Q9UBM7 475 aaKnown RBP8.21□□□□□ -1.1
BRCA1-205ENST00000461221 CTSFQ9UBX1 484 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 SLC23A1Q9UHI7 598 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 WDR1O75083 606 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 IL2RAP01589 272 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 LIMS3P0CW19 117 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 LIMS4P0CW20 117 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 CCKARP32238 428 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 LIM2P55344 173 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF385BQ569K4 471 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 COX20Q5RI15 118 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 COL13A1Q5TAT6 717 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-205ENST00000461221 LAIR1Q6GTX8 287 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 RPS19BP1Q86WX3 136 aaKnown RBP8.21□□□□□ -1.1
BRCA1-205ENST00000461221 ARHGEF39Q8N4T4 335 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 PFN4Q8NHR9 129 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 TEAD3Q99594 435 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 USP3Q9Y6I4 520 aa8.21□□□□□ -1.1
BRCA1-205ENST00000461221 SNRPGP15A8MWD9 76 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM127O75204 238 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 NRASP01111 189 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 CRYAAP02489 173 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 IAPPP10997 89 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 FGF7P21781 194 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 BMP5P22003 454 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 CSNK1EP49674 416 aaKnown RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 RAB7AP51149 207 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 MLF1P58340 268 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 SSBP1Q04837 148 aaKnown RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 OR2T2Q6IF00 324 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 PRR27Q6MZM9 219 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM64Q6YI46 380 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 UBE3DQ7Z6J8 389 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 RXFP4Q8TDU9 374 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 LRRC15Q8TF66 581 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 CCDC74AQ96AQ1 378 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 PLA2G12AQ9BZM1 189 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 GDF2Q9UK05 429 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 SIT1Q9Y3P8 196 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 MBLAC1A4D2B0 266 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF749O43361 778 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF354AO60765 605 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 LRP3O75074 770 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 PIAS2O75928 621 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 GUSBP08236 651 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF17P17021 662 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 MMP11P24347 488 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 SDHAP31040 664 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 IRS1P35568 1242 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 LIPAP38571 399 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 BCL6P41182 706 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 SELENBP1Q13228 472 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 EXOSC2Q13868 293 aaKnown RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 PRTGQ2VWP7 1150 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 CLEC9AQ6UXN8 241 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 GPR32P1Q8NGA4 272 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 HES4Q9HCC6 221 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 NDRG3Q9UGV2 375 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 POU2F2P09086 479 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms