RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-216	ENST00000460957	DNAJC9	Q8WXX5	260 aa		13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	NRBF2	Q96F24	287 aa		13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	EGLN1	Q9GZT9	426 aa		13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	CHODL	Q9H9P2	273 aa		13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	CMC2	Q9NRP2	79 aa		13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	PTTG3P	Q9NZH4	202 aa		13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	AP4S1	Q9Y587	144 aa		13.6	□□□□□ -0.23
GGA1-216	ENST00000460957	CHD3	Q12873	2000 aa	Known RBP	13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	PRR23D1	E9PI22	279 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-216	ENST00000460957		J3QW42	95 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	EBAG9	O00559	213 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	TLX2	O43763	284 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	CD5L	O43866	347 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	CDC14B	O60729	498 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	HPX	P02790	462 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	ZNF23	P17027	643 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	SPI1	P17947	270 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	ACHE	P22303	614 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	TNFSF4	P23510	183 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	GPR6	P46095	362 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	SLC6A9	P48067	706 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	GZMK	P49863	264 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	ENTPD1	P49961	510 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	CHN2	P52757	468 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	SLC25A1	P53007	311 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	TPTE	P56180	551 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	CYB5R2	Q6BCY4	276 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	CFAP77	Q6ZQR2	320 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	HIPK1	Q86Z02	1210 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	SPTSSA	Q969W0	71 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	SLCO4A1	Q96BD0	722 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	CMBL	Q96DG6	245 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	RBM4	Q9BWF3	364 aa	Known RBP	13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	OR51V1	Q9H2C8	321 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	SAP30L	Q9HAJ7	183 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	CYB5R1	Q9UHQ9	305 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	STARD10	Q9Y365	291 aa		13.59	□□□□□ -0.23
GGA1-216	ENST00000460957	FAM183A	A6NL82	134 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	VWC2L	B2RUY7	222 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	INAFM1	C9JVW0	142 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957		G3V2T6	193 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	PPIH	O43447	177 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	ICMT	O60725	284 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	RPS7	P62081	194 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	HIST1H3A	P68431	136 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	MALL	Q13021	153 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	KLHL12	Q53G59	568 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	HIST2H3PS2	Q5TEC6	136 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	HIST2H3A	Q71DI3	136 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	ZDHHC13	Q8IUH4	622 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF511	Q8NB15	262 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	OR6N2	Q8NGY6	317 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	PTP4A1	Q93096	173 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	DIRC2	Q96SL1	478 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	COPS4	Q9BT78	406 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	HCAR1	Q9BXC0	346 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	PRRG3	Q9BZD7	231 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	MED20	Q9H944	212 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	KRT84	Q9NSB2	600 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	CENPM	Q9NSP4	180 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	MRPL22	Q9NWU5	206 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	NKIRAS2	Q9NYR9	191 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	ZDHHC8	Q9ULC8	765 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	COMMD3-BMI1	R4GMX3	469 aa		13.58	□□□□□ -0.24
GGA1-216	ENST00000460957	IGHV1-69-2	A0A0G2JMI3	117 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF593	O00488	134 aa	Predicted RBP	13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	LCAT	P04180	440 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	CLU	P10909	449 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	COL8A2	P25067	703 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	GIF	P27352	417 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	GGT2	P36268	569 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	RPS27	P42677	84 aa	Known RBP	13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	PSG7	Q13046	419 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	ATP6AP1	Q15904	470 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	HFE	Q30201	348 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	FAM209A	Q5JX71	171 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	USP51	Q70EK9	711 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	DCXR	Q7Z4W1	244 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	ERI1	Q8IV48	349 aa	Known RBP	13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	GTF3A	Q92664	365 aa	Known RBP	13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	ELMOD3	Q96FG2	381 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	INTS14	Q96SY0	518 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	DDO	Q99489	341 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	NARFL	Q9H6Q4	476 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	WDR76	Q9H967	626 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	MSL2	Q9HCI7	577 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	PURG	Q9UJV8	347 aa	Known RBP	13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	RTTN	Q86VV8	2226 aa		13.57	□□□□□ -0.24
GGA1-216	ENST00000460957	IGHV4-61	A0A0C4DH41	118 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957		A8MV72	311 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-216	ENST00000460957		M0R135	149 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	NCR1	O76036	304 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	IGHV1-46	P01743	117 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	RAC2	P15153	192 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	HSD11B1	P28845	292 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	GSTT1	P30711	240 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	SLC15A1	P46059	708 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms