RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 COQ7Q99807 217 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 TRIM15Q9C019 465 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 HDHD2Q9H0R4 259 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 FN3KQ9H479 309 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 LPAR2Q9HBW0 351 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 WIPI2Q9Y4P8 454 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 DYSFO75923 2080 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 J3QW42 95 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 RGS6P49758 472 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 CDK5R2Q13319 367 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 TRIM25Q14258 630 aaKnown RBP16.04■□□□□ 0.16
COL5A1-203ENST00000460264 CLEC12AQ5QGZ9 265 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 SLC35F1Q5T1Q4 408 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 RPL13AP3Q6NVV1 102 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 CORO6Q6QEF8 472 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 OR52L1Q8NGH7 329 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 OR52E2Q8NGJ4 325 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 TMEM158Q8WZ71 300 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 CCL17Q92583 94 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 TMEM186Q96B77 213 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 CMBLQ96DG6 245 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 TIMD4Q96H15 378 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 PLA2G12AQ9BZM1 189 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 ZNF665Q9H7R5 613 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 HIF1ANQ9NWT6 349 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 VNN3Q9NY84 501 aa16.04■□□□□ 0.16
COL5A1-203ENST00000460264 PRPF19Q9UMS4 504 aaKnown RBP16.04■□□□□ 0.16
COL5A1-203ENST00000460264 BHLHE40O14503 412 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 ERFP50548 548 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 TNFAIP6P98066 277 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-203ENST00000460264 MS4A2Q01362 244 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL5A1-203ENST00000460264 SLC18B1Q6NT16 456 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 CFAP77Q6ZQR2 320 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 Q6ZR03 302 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 PHC2Q8IXK0 858 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 OR8D4Q8NGM9 314 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 OR51F2Q8NH61 342 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 RAB1CQ92928 201 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 HAVCR1Q96D42 359 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 RAB39BQ96DA2 213 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 IL20Q9NYY1 176 aa16.03■□□□□ 0.16
COL5A1-203ENST00000460264 DEAF1O75398 565 aaPredicted RBP16.02■□□□□ 0.16
COL5A1-203ENST00000460264 CCNB2O95067 398 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 GASTP01350 101 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 IGHV2-5P01817 119 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 RAC2P15153 192 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 SRP14P37108 136 aaKnown RBP16.02■□□□□ 0.16
COL5A1-203ENST00000460264 PPP1R8Q12972 351 aaKnown RBP16.02■□□□□ 0.16
COL5A1-203ENST00000460264 HLXQ14774 488 aaPredicted RBP16.02■□□□□ 0.16
COL5A1-203ENST00000460264 SLC36A3Q495N2 470 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 RASSF6Q6ZTQ3 369 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 LINC00346Q8IVM7 164 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 AQP11Q8NBQ7 271 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 APOBEC3DQ96AK3 386 aaPredicted RBP16.02■□□□□ 0.16
COL5A1-203ENST00000460264 PTTG3PQ9NZH4 202 aa16.02■□□□□ 0.16
COL5A1-203ENST00000460264 TRAV20A0A0B4J274 112 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 HLA-DQA2P01906 255 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 TNFSF4P23510 183 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 GGT2P36268 569 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 SLC3A1Q07837 685 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 HNRNPA0Q13151 305 aaKnown RBP16.01■□□□□ 0.15
COL5A1-203ENST00000460264 RSPO1Q2MKA7 263 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-203ENST00000460264 KRTAP27-1Q3LI81 207 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 FAM98BQ52LJ0 330 aaKnown RBP16.01■□□□□ 0.15
COL5A1-203ENST00000460264 OR2T5Q6IEZ7 315 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 ACSM5Q6NUN0 579 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 FBXW12Q6X9E4 464 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 CYB561A3Q8NBI2 242 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 OR2Z1Q8NG97 314 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 OR5L1Q8NGL2 311 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 OR2T29Q8NH02 315 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 PTP4A1Q93096 173 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 CCDC124Q96CT7 223 aaKnown RBP16.01■□□□□ 0.15
COL5A1-203ENST00000460264 ASB9Q96DX5 294 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 DDOQ99489 341 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 REEP1Q9H902 201 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 TBC1D23Q9NUY8 699 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 MRPL22Q9NWU5 206 aaKnown RBP16.01■□□□□ 0.15
COL5A1-203ENST00000460264 DCAF16Q9NXF7 216 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 TAS2R1Q9NYW7 299 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 CYB5R1Q9UHQ9 305 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 SAMHD1Q9Y3Z3 626 aaKnown RBP16.01■□□□□ 0.15
COL5A1-203ENST00000460264 WNK2Q9Y3S1 2297 aa16.01■□□□□ 0.15
COL5A1-203ENST00000460264 KRTAP24-1Q3LI83 254 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 ZNF362Q5T0B9 420 aaPredicted RBP16■□□□□ 0.15
COL5A1-203ENST00000460264 COLCA1Q6ZS62 124 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 OR2AJ1Q8NGZ0 328 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 POP5Q969H6 163 aaKnown RBP16■□□□□ 0.15
COL5A1-203ENST00000460264 CLPTM1LQ96KA5 538 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 PITX2Q99697 317 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 ATF6BQ99941 703 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 GAL3ST1Q99999 423 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 C1orf21Q9H246 121 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 PNRC2Q9NPJ4 139 aaKnown RBP16■□□□□ 0.15
COL5A1-203ENST00000460264 KCNG2Q9UJ96 466 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 U3KQV3 271 aa16■□□□□ 0.15
COL5A1-203ENST00000460264 ISPDA4D126 451 aa15.99■□□□□ 0.15
COL5A1-203ENST00000460264 ACSM4P0C7M7 580 aa15.99■□□□□ 0.15
COL5A1-203ENST00000460264 ANPEPP15144 967 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms