RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 RAD23AP54725 363 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 OR8B8Q15620 311 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 DUSP7Q16829 419 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 FAM201AQ5SY85 155 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 ARMC4Q5T2S8 1044 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 INTS11Q5TA45 600 aaKnown RBP6.56□□□□□ -1.36
HPS4-207ENST00000459918 WDR25Q64LD2 544 aaPredicted RBP6.56□□□□□ -1.36
HPS4-207ENST00000459918 OR2T2Q6IF00 324 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 LYPD2Q6UXB3 125 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 Q6ZSV7 163 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 IGFN1Q86VF2 1251 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 C11orf44Q8N8P7 122 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 TMEM255BQ8WV15 326 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 PTP4A1Q93096 173 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 HAVCR1Q96D42 359 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 SPDL1Q96EA4 605 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 MAELQ96JY0 434 aaKnown RBP6.56□□□□□ -1.36
HPS4-207ENST00000459918 WDFY2Q96P53 400 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 SEPHS2Q99611 448 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 ALG12Q9BV10 488 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 RSPO3Q9BXY4 272 aaPredicted RBP6.56□□□□□ -1.36
HPS4-207ENST00000459918 TXNIPQ9H3M7 391 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 PRDM13Q9H4Q3 707 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 MEPEQ9NQ76 525 aaPredicted RBP6.56□□□□□ -1.36
HPS4-207ENST00000459918 UFSP2Q9NUQ7 469 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 VAPAQ9P0L0 249 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 SLAMF8Q9P0V8 285 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 TMCC3Q9ULS5 477 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 STARD10Q9Y365 291 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 SH3GLB1Q9Y371 365 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 CAB39Q9Y376 341 aaPredicted RBP6.56□□□□□ -1.36
HPS4-207ENST00000459918 MED31Q9Y3C7 131 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 USH1CQ9Y6N9 552 aa6.56□□□□□ -1.36
HPS4-207ENST00000459918 CENPVL3A0A0U1RRI6 287 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 A6NIZ1 184 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 C22orf46C9J442 243 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 H7C1C5 153 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 M0QX08 132 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 XKRYO14609 159 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 ADAM20O43506 726 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 OPN1MWP04001 364 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 HLA-DPB1P04440 258 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 FBP1P09467 338 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 OPN1MW2P0DN77 364 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 OPN1MW3P0DN78 364 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 RAC2P15153 192 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 EEF1B2P24534 225 aaKnown RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 FPR3P25089 353 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 GABRA5P31644 462 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 RPL4P36578 427 aaKnown RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 RBM34P42696 430 aaKnown RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 IER3P46695 156 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 CENPAP49450 140 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 ZNF133P52736 654 aaPredicted RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 LOXL3P58215 753 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 MTPNP58546 118 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 CTXN1P60606 82 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 RAP1BP61224 184 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 RPL27P61353 136 aaKnown RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 LCN6P62502 163 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 RAP1AP62834 184 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 DBPQ10586 325 aaPredicted RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 LRIF1Q5T3J3 769 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 SFRP4Q6FHJ7 346 aaPredicted RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 SLC25A47Q6Q0C1 308 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 SYT9Q86SS6 491 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 CROCCP2Q86T23 111 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 PATL1Q86TB9 770 aaKnown RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 MSRB3Q8IXL7 192 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 MICU2Q8IYU8 434 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 ZSCAN4Q8NAM6 433 aaPredicted RBP6.55□□□□□ -1.36
HPS4-207ENST00000459918 OR8G5Q8NG78 346 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 TMEM239Q8WW34 195 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 RASSF5Q8WWW0 418 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 SLC7A6Q92536 515 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 PPP1R14AQ96A00 147 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 TLCD1Q96CP7 247 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 RASD2Q96D21 266 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 TBX15Q96SF7 602 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 HCAR1Q9BXC0 346 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 PPA2Q9H2U2 334 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 TOR3AQ9H497 397 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 IKZF5Q9H5V7 419 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 WDR76Q9H967 626 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 TMBIM4Q9HC24 238 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 POLE4Q9NR33 117 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 C20orf141Q9NUB4 165 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 TMEM100Q9NV29 134 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 ONECUT1Q9UBC0 465 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 DNAJB11Q9UBS4 358 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 VPREB3Q9UKI3 123 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 PLXNB1O43157 2135 aa6.55□□□□□ -1.36
HPS4-207ENST00000459918 FBP2O00757 339 aa6.54□□□□□ -1.36
HPS4-207ENST00000459918 SHOX2O60902 331 aaPredicted RBP6.54□□□□□ -1.36
HPS4-207ENST00000459918 THY1P04216 161 aa6.54□□□□□ -1.36
HPS4-207ENST00000459918 COX5BP10606 129 aa6.54□□□□□ -1.36
HPS4-207ENST00000459918 IFI30P13284 250 aa6.54□□□□□ -1.36
HPS4-207ENST00000459918 HOXB9P17482 250 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms