RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 RPS7P62081 194 aaKnown RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 HIST1H3AP68431 136 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 GABPB1Q06547 395 aaPredicted RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 MAD2L1BPQ15013 274 aaPredicted RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 ZSCAN26Q16670 478 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 CLEC12BQ2HXU8 276 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 ALKBH6Q3KRA9 238 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 ZNF718Q3SXZ3 478 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 SPATA46Q5T0L3 261 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 HIST2H3PS2Q5TEC6 136 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 SLC18B1Q6NT16 456 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 ARL9Q6T311 187 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 PRSS57Q6UWY2 283 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 UNQ6126/PRO20091Q6UXV3 157 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 HIST2H3AQ71DI3 136 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 CXXC5Q7LFL8 322 aaKnown RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 ZCCHC24Q8N2G6 241 aaKnown RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 PARP8Q8N3A8 854 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 OR6N2Q8NGY6 317 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 SYNPRQ8TBG9 265 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 STMN2Q93045 179 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 SORCS2Q96PQ0 1159 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 PITX2Q99697 317 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 CIB1Q99828 191 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 OSBPL10Q9BXB5 764 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 RIBC2Q9H4K1 309 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 ELOVL3Q9HB03 270 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 BARX1Q9HBU1 254 aaPredicted RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 HINT3Q9NQE9 182 aaKnown RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 FRRS1LQ9P0K9 344 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 TAAR3PQ9P1P4 343 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 MYEF2Q9P2K5 600 aaKnown RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 CYB5R1Q9UHQ9 305 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 TMEFF2Q9UIK5 374 aaPredicted RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 COMMD3-BMI1R4GMX3 469 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 USF3Q68DE3 2245 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 APCP25054 2843 aa8.66□□□□□ -1.02
RFX3-210ENST00000457373 ANKRD17O75179 2603 aaKnown RBP8.66□□□□□ -1.02
RFX3-210ENST00000457373 OR6C6A6NF89 314 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 ZAR1LA6NP61 321 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 LY6HO94772 140 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 PSKH1P11801 424 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 CD99P14209 185 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 EPHA2P29317 976 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 GCH1P30793 250 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 POLR2IP36954 125 aaKnown RBP8.65□□□□□ -1.02
RFX3-210ENST00000457373 ALDH3B1P43353 468 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 EVX1P49640 407 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 ENTPD1P49961 510 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 PPOXP50336 477 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 BLVRAP53004 296 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 KLF3P57682 345 aaPredicted RBP8.65□□□□□ -1.02
RFX3-210ENST00000457373 SELENOVP59797 346 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 PPP1CBP62140 327 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 PPP2R2BQ00005 443 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 EIF2B1Q14232 305 aaKnown RBP8.65□□□□□ -1.02
RFX3-210ENST00000457373 LINC01590Q5TEZ4 76 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 SLX4IPQ5VYV7 408 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 CFAP77Q6ZQR2 320 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 RFPL4BQ6ZWI9 263 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 DCXRQ7Z4W1 244 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 LURAP1LQ8IV03 231 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 ERI1Q8IV48 349 aaKnown RBP8.65□□□□□ -1.02
RFX3-210ENST00000457373 BBS1Q8NFJ9 593 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 ZMYND19Q96E35 227 aaPredicted RBP8.65□□□□□ -1.02
RFX3-210ENST00000457373 MAP6Q96JE9 813 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 COQ7Q99807 217 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 RBM4BQ9BQ04 359 aaKnown RBP8.65□□□□□ -1.02
RFX3-210ENST00000457373 OR2J1Q9GZK6 312 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 HDHD2Q9H0R4 259 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 RAB1BQ9H0U4 201 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 TPK1Q9H3S4 243 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 POFUT1Q9H488 388 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 CENPMQ9NSP4 180 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 KCNG2Q9UJ96 466 aa8.65□□□□□ -1.02
RFX3-210ENST00000457373 ITPR2Q14571 2701 aa8.65□□□□□ -1.03
RFX3-210ENST00000457373 CHD3Q12873 2000 aaKnown RBP8.64□□□□□ -1.03
RFX3-210ENST00000457373 PLCE1Q9P212 2302 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 ARID1AO14497 2285 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 TRIM64A6NGJ6 449 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 ERICH4A6NGS2 130 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 TRIM64BA6NI03 449 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 ADARB2-AS1A8MUL3 147 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 F5H5K5 113 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 M0R129 80 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 M0R233 179 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 EI24O14681 340 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 TLX2O43763 284 aaPredicted RBP8.64□□□□□ -1.03
RFX3-210ENST00000457373 PRKYO43930 277 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 ZNF250P15622 560 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 MPV17P39210 176 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 EFNA4P52798 201 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 APOFQ13790 326 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 TAF13Q15543 124 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 CARTPTQ16568 116 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 NKPD1Q17RQ9 610 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 ZIK1Q3SY52 487 aaPredicted RBP8.64□□□□□ -1.03
RFX3-210ENST00000457373 DPY19L4Q7Z388 723 aa8.64□□□□□ -1.03
RFX3-210ENST00000457373 BCDIN3DQ7Z5W3 292 aaKnown RBP8.64□□□□□ -1.03
RFX3-210ENST00000457373 NAA40Q86UY6 237 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms