RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 AP3M1Q9Y2T2 418 aa6.73□□□□□ -1.33
NIF3L1-209ENST00000454952 NOP16Q9Y3C1 178 aaKnown RBP6.73□□□□□ -1.33
NIF3L1-209ENST00000454952 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 KIR2DS1A0A191URI9 304 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 OR6C6A6NF89 314 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 EFCAB9A8MZ26 197 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 SRRM5B3KS81 715 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 PHYHO14832 338 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 NDUFA7O95182 113 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 LIPFP07098 398 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 VSIG8P0DPA2 414 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 SELEP16581 610 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 RPL4P36578 427 aaKnown RBP6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 PITPNBP48739 271 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 NPY4RP50391 375 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 CRYBA2P53672 197 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 SEC61A1P61619 476 aaKnown RBP6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 LSM6P62312 80 aaKnown RBP6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 PRKCDQ05655 676 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 TRAM2Q15035 370 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 MAPRE2Q15555 327 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 CYBRD1Q53TN4 286 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 SPRNQ5BIV9 151 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 CD276Q5ZPR3 534 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 GPR139Q6DWJ6 353 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 FBXW12Q6X9E4 464 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 Q6ZR03 302 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 RRM2BQ7LG56 351 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 CALHM3Q86XJ0 350 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 GLB1L2Q8IW92 636 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 OFCC1Q8IZS5 231 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 CLDN22Q8N7P3 220 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 CELF2-AS1Q8N7Q2 184 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 OR8G5Q8NG78 346 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 OR11L1Q8NGX0 322 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 OR51A7Q8NH64 312 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 OR1F12Q8NHA8 337 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 ERGIC1Q969X5 290 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 APOBEC3DQ96AK3 386 aaPredicted RBP6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 FAM71F1Q96KD3 344 aaPredicted RBP6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 MEGF10Q96KG7 1140 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 HCAR1Q9BXC0 346 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 C1QTNF5Q9BXJ0 243 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 PRDM13Q9H4Q3 707 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 INTS9Q9NV88 658 aaKnown RBP6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 GID8Q9NWU2 228 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 DCAF16Q9NXF7 216 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 CLN8Q9UBY8 286 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 TMEM5Q9Y2B1 443 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 WNK1Q9H4A3 2382 aa6.72□□□□□ -1.33
NIF3L1-209ENST00000454952 TRAV27A0A087WT01 109 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 TRAV40A0A0B4J280 105 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 TEX13CA0A0J9YWL9 993 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 PRSS37A4D1T9 235 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 FAM220BPB1ANY3 271 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 HOXA3O43365 443 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 ENSAO43768 121 aaKnown RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 SHOX2O60902 331 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 KHDRBS3O75525 346 aaKnown RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 GPANK1O95872 356 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 IFNW1P05000 195 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 CD14P08571 375 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 IGHV4-38-2P0DP08 117 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 TNFRSF1BP20333 461 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 MDKP21741 143 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 KDELR2P33947 212 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 OR1E2P47887 323 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 RAG2P55895 527 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 SELENOWP63302 87 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 PAX2Q02962 417 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 ZNF404Q494X3 552 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 LRRC23Q53EV4 343 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 BEND6Q5SZJ8 279 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 DNM1P34Q6PK57 102 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 ZNF730Q6ZMV8 503 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 DCDC5Q6ZRR9 648 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 ADCK1Q86TW2 530 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 IGFN1Q86VF2 1251 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 CYP4Z1Q86W10 505 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 NRMQ8IXM6 262 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 LRRC75AQ8NAA5 344 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 OR10S1Q8NGN2 331 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 WFDC12Q8WWY7 111 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 ACOT11Q8WXI4 607 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 TPD52L3Q96J77 140 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 ATP6V1G3Q96LB4 118 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 ZNF570Q96NI8 536 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 CCT8L2Q96SF2 557 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 NUDT16L1Q9BRJ7 211 aaKnown RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 HDHD2Q9H0R4 259 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 MMP27Q9H306 513 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 ANKRD19PQ9H560 264 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 LIN7BQ9HAP6 207 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 TMEM165Q9HC07 324 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 EMC7Q9NPA0 242 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 KRCC1Q9NPI7 259 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 TRIM36Q9NQ86 728 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 TMEM100Q9NV29 134 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 A4GNTQ9UNA3 340 aa6.71□□□□□ -1.34
NIF3L1-209ENST00000454952 POLR1DQ9Y2S0 133 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms