RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 SLC15A1P46059 708 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 BLVRAP53004 296 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 NR1H2P55055 460 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 NAAAQ02083 359 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 BEX5Q5H9J7 111 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 MEDAGQ5VYS4 303 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 TMEM53Q6P2H8 277 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 DCXRQ7Z4W1 244 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 DPPA2Q7Z7J5 298 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 NAA40Q86UY6 237 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 C8orf59Q8N0T1 100 aaPredicted RBP13.53□□□□□ -0.24
VCX3B-204ENST00000453306 OR10H5Q8NGA6 315 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 OR51G2Q8NGK0 314 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 OTOSQ8NHW6 89 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 TMEM171Q8WVE6 324 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 SGCDQ92629 289 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 RNFT2Q96EX2 444 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 ZNF184Q99676 751 aaPredicted RBP13.53□□□□□ -0.24
VCX3B-204ENST00000453306 ZNF649Q9BS31 505 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 RASSF4Q9H2L5 321 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 CXorf56Q9H5V9 222 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 MRPS18AQ9NVS2 196 aaKnown RBP13.53□□□□□ -0.24
VCX3B-204ENST00000453306 CLN6Q9NWW5 311 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 HSPE1-MOB4S4R3N1 261 aa13.53□□□□□ -0.24
VCX3B-204ENST00000453306 JMJD1CQ15652 2540 aa13.52□□□□□ -0.24
VCX3B-204ENST00000453306 IGHV2OR16-5A0A0B4J2B6 119 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 SHISA9B4DS77 424 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 SGCEO43556 437 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 XPNPEP2O43895 674 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 MTNR1AP48039 350 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 PCBD1P61457 104 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 MVKQ03426 396 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 MSMPQ1L6U9 139 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 C3orf36Q3SXR2 165 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 C1QTNF12Q5T7M4 302 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 SPATC1Q76KD6 591 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 CIARTQ8N365 385 aaPredicted RBP13.52□□□□□ -0.25
VCX3B-204ENST00000453306 SETD9Q8NE22 299 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 OR1F12Q8NHA8 337 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 NANOS1Q8WY41 292 aaKnown RBP13.52□□□□□ -0.25
VCX3B-204ENST00000453306 WACQ9BTA9 647 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 CDADC1Q9BWV3 514 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 YIPF3Q9GZM5 350 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 RAB26Q9ULW5 256 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 EXOGQ9Y2C4 368 aaKnown RBP13.52□□□□□ -0.25
VCX3B-204ENST00000453306 MYRFQ9Y2G1 1151 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 POLR1DQ9Y2S0 133 aa13.52□□□□□ -0.25
VCX3B-204ENST00000453306 RAB36O95755 333 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 PCSK6P29122 969 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 WNT5AP41221 380 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 PTH2RP49190 550 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 ZNF85Q03923 595 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 SCRN3Q0VDG4 424 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 TMED1Q13445 227 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 EIF2B1Q14232 305 aaKnown RBP13.51□□□□□ -0.25
VCX3B-204ENST00000453306 ELFN2Q5R3F8 820 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 C6orf141Q5SZD1 244 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 SLC35F2Q8IXU6 374 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 SLC30A7Q8NEW0 376 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 GJC3Q8NFK1 279 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 GGHQ92820 318 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 RFKQ969G6 155 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
VCX3B-204ENST00000453306 SLAMF6Q96DU3 332 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 CNN2Q99439 309 aaKnown RBP13.51□□□□□ -0.25
VCX3B-204ENST00000453306 TBX5Q99593 518 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 TTTY10Q9BZA0 68 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 KCNN2Q9H2S1 579 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 PLEK2Q9NYT0 353 aa13.51□□□□□ -0.25
VCX3B-204ENST00000453306 A0A1W2PQL4 384 aaPredicted RBP13.5□□□□□ -0.25
VCX3B-204ENST00000453306 ATP6V1G2-DDX39BF2Z307 99 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 PSMD9O00233 223 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 ABCD4O14678 606 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 DENRO43583 198 aaKnown RBP13.5□□□□□ -0.25
VCX3B-204ENST00000453306 DOK2O60496 412 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 PAX1P15863 534 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 PTAFRP25105 342 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 STOMP27105 288 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 OPRL1P41146 370 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 HSPA13P48723 471 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 RAB35Q15286 201 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 ZNF684Q5T5D7 378 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 LCN1P1Q5VSP4 162 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 ADAM5Q6NVV9 412 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 ZNF704Q6ZNC4 412 aaPredicted RBP13.5□□□□□ -0.25
VCX3B-204ENST00000453306 KBTBD8Q8NFY9 601 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 OR52I1Q8NGK6 324 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 OR2AJ1Q8NGZ0 328 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 THEM6Q8WUY1 208 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 RNF133Q8WVZ7 376 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 CNBD2Q96M20 576 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 Q96MT0 163 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 C1orf198Q9H425 327 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 CENPMQ9NSP4 180 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 DDX28Q9NUL7 540 aaKnown RBP13.5□□□□□ -0.25
VCX3B-204ENST00000453306 SLCO1C1Q9NYB5 712 aa13.5□□□□□ -0.25
VCX3B-204ENST00000453306 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.5□□□□□ -0.25
VCX3B-204ENST00000453306 C5orf49A4QMS7 147 aa13.49□□□□□ -0.25
VCX3B-204ENST00000453306 TRIM64A6NGJ6 449 aa13.49□□□□□ -0.25
VCX3B-204ENST00000453306 TRIM64BA6NI03 449 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms