RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DCLRE1CQ96SD1 692 aaKnown RBP10.92□□□□□ -0.66
CHD3-206ENST00000452447 NMNAT3Q96T66 252 aa10.92□□□□□ -0.66
CHD3-206ENST00000452447 POFUT1Q9H488 388 aa10.92□□□□□ -0.66
CHD3-206ENST00000452447 IL1RAPQ9NPH3 570 aa10.92□□□□□ -0.66
CHD3-206ENST00000452447 ARL8BQ9NVJ2 186 aa10.92□□□□□ -0.66
CHD3-206ENST00000452447 UBAP1Q9NZ09 502 aa10.92□□□□□ -0.66
CHD3-206ENST00000452447 ATPIF1Q9UII2 106 aa10.92□□□□□ -0.66
CHD3-206ENST00000452447 J3QW42 95 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 DCTN6O00399 190 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 SURF4O15260 269 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 DEAF1O75398 565 aaPredicted RBP10.91□□□□□ -0.66
CHD3-206ENST00000452447 GPANK1O95872 356 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 HIST1H1CP16403 213 aaKnown RBP10.91□□□□□ -0.66
CHD3-206ENST00000452447 MEP1BQ16820 701 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 ZNF771Q7L3S4 317 aaPredicted RBP10.91□□□□□ -0.66
CHD3-206ENST00000452447 ZDHHC21Q8IVQ6 265 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 OR6V1Q8N148 313 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 OR4K13Q8NH42 304 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 ST7LQ8TDW4 575 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 HAVCR1Q96D42 359 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 SAMD8Q96LT4 415 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 CDADC1Q9BWV3 514 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 HDHD2Q9H0R4 259 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 B9D1Q9UPM9 204 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 NPTNQ9Y639 398 aa10.91□□□□□ -0.66
CHD3-206ENST00000452447 IDH3BO43837 385 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 KRT36O76013 467 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 HLA-DQA2P01906 255 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 DBHP09172 617 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 RAC2P15153 192 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 SLC36A3Q495N2 470 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 SPRNQ5BIV9 151 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 DCAF12L2Q5VW00 463 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 CORO6Q6QEF8 472 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 GNPDA2Q8TDQ7 276 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 APOBEC3DQ96AK3 386 aaPredicted RBP10.9□□□□□ -0.66
CHD3-206ENST00000452447 COQ7Q99807 217 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.66
CHD3-206ENST00000452447 G6PC2Q9NQR9 355 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 TMEM106BQ9NUM4 274 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 PTTG3PQ9NZH4 202 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 IL19Q9UHD0 177 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 PCDHB10Q9UN67 800 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 PPP1R3CQ9UQK1 317 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 LHFPL6Q9Y693 200 aa10.9□□□□□ -0.66
CHD3-206ENST00000452447 IGLV1-36A0A0B4J1U3 117 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 SBK2P0C263 348 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 GATA3P23771 443 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 GSSP48637 474 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 HIST1H3AP68431 136 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 COX10Q12887 443 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 TSPAN31Q12999 210 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 HIST2H3PS2Q5TEC6 136 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 CYP2R1Q6VVX0 501 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 Q6ZR03 302 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 HIST2H3AQ71DI3 136 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 OR5AS1Q8N127 324 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 ATG16L2Q8NAA4 619 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 SLC26A10Q8NG04 563 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 OR52L1Q8NGH7 329 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 OR52E2Q8NGJ4 325 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 OR2AJ1Q8NGZ0 328 aa10.9□□□□□ -0.67
CHD3-206ENST00000452447 NBEAL1Q6ZS30 2694 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 LOC105371242A0A075B767 164 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 A0A0A6YYJ9 748 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 J3QLI3 93 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 TNFRSF11BO00300 401 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 LCN2P80188 198 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 HLXQ14774 488 aaPredicted RBP10.89□□□□□ -0.67
CHD3-206ENST00000452447 CLEC12AQ5QGZ9 265 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 SLC35F1Q5T1Q4 408 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 OR2T2Q6IF00 324 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 RPL13AP3Q6NVV1 102 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 SLC27A4Q6P1M0 643 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 PGBD2Q6P3X8 592 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 FBXW12Q6X9E4 464 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 ZNF620Q6ZNG0 422 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 ZBTB46Q86UZ6 589 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 KLHL36Q8N4N3 616 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 LINC00471Q8N535 108 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 SPICQ8N5J4 248 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 SDR9C7Q8NEX9 313 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 ZNF418Q8TF45 676 aaPredicted RBP10.89□□□□□ -0.67
CHD3-206ENST00000452447 ITLN1Q8WWA0 313 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 ZNF582Q96NG8 517 aaPredicted RBP10.89□□□□□ -0.67
CHD3-206ENST00000452447 OR2V2Q96R30 315 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 PITX2Q99697 317 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 DCAF16Q9NXF7 216 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 ACTR3BQ9P1U1 418 aa10.89□□□□□ -0.67
CHD3-206ENST00000452447 OR6C68A6NDL8 312 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 F5H5K5 113 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 EBAG9O00559 213 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 FOXH1O75593 365 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 AVPP01185 164 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 ERFP50548 548 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHD3-206ENST00000452447 ECH1Q13011 328 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 SLC18B1Q6NT16 456 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 ZNF283Q8N7M2 679 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms