RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PITX2Q99697 317 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 GAL3ST1Q99999 423 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 THTPAQ9BU02 230 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 EGLN1Q9GZT9 426 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 RACGAP1Q9H0H5 632 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 MUC13Q9H3R2 512 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 ZNF665Q9H7R5 613 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 REEP1Q9H902 201 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 CYSLTR2Q9NS75 346 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 HIF1ANQ9NWT6 349 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 DCAF16Q9NXF7 216 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 TMEFF2Q9UIK5 374 aaPredicted RBP8.22□□□□□ -1.09
USP54-207ENST00000451492 PURGQ9UJV8 347 aaKnown RBP8.22□□□□□ -1.09
USP54-207ENST00000451492 SAMHD1Q9Y3Z3 626 aaKnown RBP8.22□□□□□ -1.09
USP54-207ENST00000451492 WIPI2Q9Y4P8 454 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 B4DSR2 109 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 F5H5K5 113 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 H3BSA7 217 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ARPC3O15145 178 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ICMTO60725 284 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 RGS9O75916 674 aaPredicted RBP8.21□□□□□ -1.1
USP54-207ENST00000451492 KRT36O76013 467 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 MSMBP08118 114 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 MAGEA2P43356 314 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 TMEM33P57088 247 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 MRPS11P82912 194 aaKnown RBP8.21□□□□□ -1.1
USP54-207ENST00000451492 SPATS1Q496A3 300 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ZMAT1Q5H9K5 638 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 FAM209AQ5JX71 171 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 OR2T5Q6IEZ7 315 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 OR2T2Q6IF00 324 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 SLC18B1Q6NT16 456 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 PGM2L1Q6PCE3 622 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 Q6ZR03 302 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 PHC2Q8IXK0 858 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ARHGAP24Q8N264 748 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 SLC37A3Q8NCC5 494 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 SLC26A10Q8NG04 563 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 OR4C15Q8NGM1 316 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 OR2T29Q8NH02 315 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 OR51F2Q8NH61 342 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 BCAS4Q8TDM0 211 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ITLN1Q8WWA0 313 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ZNRF4Q8WWF5 429 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 OTULINQ96BN8 352 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ASB9Q96DX5 294 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 TIMD4Q96H15 378 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ATF6BQ99941 703 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 NIPSNAP1Q9BPW8 284 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 WACQ9BTA9 647 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 TSSK6Q9BXA6 273 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 HDHD2Q9H0R4 259 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 MAGIXQ9H6Y5 334 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 TBCCD1Q9NVR7 557 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 MRPL22Q9NWU5 206 aaKnown RBP8.21□□□□□ -1.1
USP54-207ENST00000451492 NKIRAS2Q9NYR9 191 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ZDHHC8Q9ULC8 765 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 PRPF19Q9UMS4 504 aaKnown RBP8.21□□□□□ -1.1
USP54-207ENST00000451492 N6AMT1Q9Y5N5 214 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 MXRA5Q9NR99 2828 aa8.21□□□□□ -1.1
USP54-207ENST00000451492 ARHGAP32A7KAX9 2087 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 H0YL77 283 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 H3BN98 237 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 BHLHE40O14503 412 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 GNGT2O14610 69 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 UBOX5O94941 541 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 CST1P01037 141 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 SPARCP09486 303 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 CLUP10909 449 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 PSKH1P11801 424 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 ZNF823P16415 610 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 TNFSF4P23510 183 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 SLC6A9P48067 706 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 RGS6P49758 472 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 DVL1P1P54792 670 aaPredicted RBP8.2□□□□□ -1.1
USP54-207ENST00000451492 LMO4P61968 165 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 COX10Q12887 443 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 CRMP1Q14194 572 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 KCNMB1Q16558 191 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 MICAQ29983 383 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 SLC36A3Q495N2 470 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 RPL13AP3Q6NVV1 102 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 FAHD2BQ6P2I3 314 aaPredicted RBP8.2□□□□□ -1.1
USP54-207ENST00000451492 SHQ1Q6PI26 577 aaKnown RBP8.2□□□□□ -1.1
USP54-207ENST00000451492 RASSF6Q6ZTQ3 369 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 SPATC1Q76KD6 591 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 TRPM8Q7Z2W7 1104 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 NAA40Q86UY6 237 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 ZBTB46Q86UZ6 589 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 SPATA24Q86W54 205 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 C1orf174Q8IYL3 243 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 LINC00471Q8N535 108 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 IQCF1Q8N6M8 205 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 ATG16L2Q8NAA4 619 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 OR10G2Q8NGC3 310 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 OR6K6Q8NGW6 343 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 OR4Q3Q8NH05 313 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 ZNF420Q8TAQ5 688 aaPredicted RBP8.2□□□□□ -1.1
USP54-207ENST00000451492 RAB1CQ92928 201 aa8.2□□□□□ -1.1
USP54-207ENST00000451492 TMEM186Q96B77 213 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms