RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CR1P17927 2039 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 TANC2Q9HCD6 1990 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 ZNF593O00488 134 aaPredicted RBP12.31□□□□□ -0.44
COL3A1-203ENST00000450867 PRKYO43930 277 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 ABHD16AO95870 558 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 NGFP01138 241 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 LCKP06239 509 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 GSTT1P30711 240 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 POLR2IP36954 125 aaKnown RBP12.31□□□□□ -0.44
COL3A1-203ENST00000450867 EFNA4P52798 201 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 RAD23AP54725 363 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 KLF3P57682 345 aaPredicted RBP12.31□□□□□ -0.44
COL3A1-203ENST00000450867 ERVS71-1P61550 626 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 PPP1CBP62140 327 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 AADACL4Q5VUY2 407 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 LRP11Q86VZ4 500 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 CBR4Q8N4T8 237 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 BBS1Q8NFJ9 593 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 SYNPRQ8TBG9 265 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 TMEM163Q8TC26 289 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 SLC7A6Q92536 515 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 HRASLS5Q96KN8 279 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 SORCS2Q96PQ0 1159 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 TMUB1Q9BVT8 246 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 C1QTNF5Q9BXJ0 243 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 DLL4Q9NR61 685 aa12.31□□□□□ -0.44
COL3A1-203ENST00000450867 MYEF2Q9P2K5 600 aaKnown RBP12.31□□□□□ -0.44
COL3A1-203ENST00000450867 CCDC182A6NF36 153 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 M0R233 179 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
COL3A1-203ENST00000450867 DBHP09172 617 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 ACSM4P0C7M7 580 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 RPS27P42677 84 aaKnown RBP12.3□□□□□ -0.44
COL3A1-203ENST00000450867 GGTLC2Q14390 218 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 ZNF718Q3SXZ3 478 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 NXNL2Q5VZ03 156 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 SHFQ7M4L6 423 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 DPY19L4Q7Z388 723 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 DCXRQ7Z4W1 244 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 OTOSQ8NHW6 89 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 ABHD4Q8TB40 342 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 SLC25A40Q8TBP6 338 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 KLF14Q8TD94 323 aaPredicted RBP12.3□□□□□ -0.44
COL3A1-203ENST00000450867 RNF133Q8WVZ7 376 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 ZMYND19Q96E35 227 aaPredicted RBP12.3□□□□□ -0.44
COL3A1-203ENST00000450867 TEAD3Q99594 435 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 PITX2Q99697 317 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 SYT3Q9BQG1 590 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 OR2J1Q9GZK6 312 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 OR51V1Q9H2C8 321 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 MS4A5Q9H3V2 200 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 SLCO1C1Q9NYB5 712 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 ORC6Q9Y5N6 252 aa12.3□□□□□ -0.44
COL3A1-203ENST00000450867 NSD1Q96L73 2696 aaPredicted RBP12.29□□□□□ -0.44
COL3A1-203ENST00000450867 ZNF878C9JN71 531 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 CLPTM1O96005 669 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 ADH4P08319 380 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 SPARCP09486 303 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 MPV17P39210 176 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 NUDT6P53370 316 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 SELENOVP59797 346 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 APOFQ13790 326 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 MOGQ16653 247 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 TMEM255AQ5JRV8 349 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 LCN1P1Q5VSP4 162 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 FBXW12Q6X9E4 464 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 ERI1Q8IV48 349 aaKnown RBP12.29□□□□□ -0.44
COL3A1-203ENST00000450867 TCEANCQ8N8B7 351 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 OR8J1Q8NGP2 316 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 OR6N2Q8NGY6 317 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 NEU4Q8WWR8 484 aaPredicted RBP12.29□□□□□ -0.44
COL3A1-203ENST00000450867 APOBEC3DQ96AK3 386 aaPredicted RBP12.29□□□□□ -0.44
COL3A1-203ENST00000450867 OTULINQ96BN8 352 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 SLAMF6Q96DU3 332 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 SLC29A1Q99808 456 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 ABHD6Q9BV23 337 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 RAB1BQ9H0U4 201 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 RIBC2Q9H4K1 309 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 HAO2Q9NYQ3 351 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 CGGBP1Q9UFW8 167 aaPredicted RBP12.29□□□□□ -0.44
COL3A1-203ENST00000450867 GPR160Q9UJ42 338 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 STARD10Q9Y365 291 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 GRIP1Q9Y3R0 1128 aa12.29□□□□□ -0.44
COL3A1-203ENST00000450867 M0R129 80 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 TLX2O43763 284 aaPredicted RBP12.28□□□□□ -0.44
COL3A1-203ENST00000450867 ADRA2AP08913 450 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 ANPEPP15144 967 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 FOSL1P15407 271 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 KITLGP21583 273 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 GCH1P30793 250 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 MMP15P51511 669 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 TPTEP56180 551 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 DSCR9P59020 149 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 CLEC12BQ2HXU8 276 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 KLHL12Q53G59 568 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 SLC25A30Q5SVS4 291 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 ZBTB49Q6ZSB9 765 aa12.28□□□□□ -0.44
COL3A1-203ENST00000450867 MEPCEQ7L2J0 689 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms