RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	LEG1	Q6P5S2	330 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	DHFR2	Q86XF0	187 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	OR6V1	Q8N148	313 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	SLC26A10	Q8NG04	563 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	OR13G1	Q8NGZ3	307 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	CCL17	Q92583	94 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	CMBL	Q96DG6	245 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	RERGL	Q9H628	205 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	SRA1	Q9HD15	236 aa	Known RBP	13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	TREM2	Q9NZC2	230 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	METRN	Q9UJH8	293 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	BAIAP2	Q9UQB8	552 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	STARD10	Q9Y365	291 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	WIPI2	Q9Y4P8	454 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	LYVE1	Q9Y5Y7	322 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	STAB1	Q9NY15	2570 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	ZSCAN5B	A6NJL1	495 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	TNFRSF11B	O00300	401 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	PPP1R3D	O95685	299 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	IGHV2-5	P01817	119 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	MSX2	P35548	267 aa	Predicted RBP	13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	CENPA	P49450	140 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	BLVRA	P53004	296 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	GYS2	P54840	703 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	TNFAIP6	P98066	277 aa	Predicted RBP	13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	FAM98B	Q52LJ0	330 aa	Known RBP	13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	LCN8	Q6JVE9	175 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	PGBD2	Q6P3X8	592 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	COLCA1	Q6ZS62	124 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	RASSF6	Q6ZTQ3	369 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	ZNF283	Q8N7M2	679 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	CCDC197	Q8NCU1	140 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	OR2AJ1	Q8NGZ0	328 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	NMNAT3	Q96T66	252 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	CYB5R1	Q9UHQ9	305 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	LHFPL6	Q9Y693	200 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385	CDH10	Q9Y6N8	788 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385		V9GYQ6	96 aa		13.59	□□□□□ -0.23
SGCE-208	ENST00000450385		A0A0G2JMP0	313 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385		A0A0X1KG70	313 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	FAM157A	C9JC47	383 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	DYNC1I1	O14576	645 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	RER1	O15258	196 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	TCF21	O43680	179 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	DEAF1	O75398	565 aa	Predicted RBP	13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	MPZL1	O95297	269 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	PNP	P00491	289 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	KRTAP27-1	Q3LI81	207 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	TMEM155	Q4W5P6	130 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	OR4M2	Q8NGB6	313 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	OR2T4	Q8NH00	348 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	OR4K13	Q8NH42	304 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	ZFAND2B	Q8WV99	257 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	ZNF582	Q96NG8	517 aa	Predicted RBP	13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	HCAR1	Q9BXC0	346 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	C1QTNF5	Q9BXJ0	243 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	DGCR6L	Q9BY27	220 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	MSL2	Q9HCI7	577 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	RPRD1B	Q9NQG5	326 aa	Known RBP	13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	NOP16	Q9Y3C1	178 aa	Known RBP	13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	NPTN	Q9Y639	398 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385	DOCK11	Q5JSL3	2073 aa		13.58	□□□□□ -0.24
SGCE-208	ENST00000450385		A0A1B0GWJ7	208 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	OR6C68	A6NDL8	312 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	DCTN6	O00399	190 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	WNT9B	O14905	357 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	CCNB2	O95067	398 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	ZNF823	P16415	610 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	MVK	Q03426	396 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	TRAP1	Q12931	704 aa	Known RBP	13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	MICA	Q29983	383 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	TMEM255A	Q5JRV8	349 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	SLC18B1	Q6NT16	456 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	CD300LD	Q6UXZ3	194 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	LNX2	Q8N448	690 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	SPIC	Q8N5J4	248 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	CELF2-AS1	Q8N7Q2	184 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	OR8G5	Q8NG78	346 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	OR2Z1	Q8NG97	314 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	ASB9	Q96DX5	294 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	TSSK2	Q96PF2	358 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	DDO	Q99489	341 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	ATF6B	Q99941	703 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	G6PC2	Q9NQR9	355 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	TMEM106B	Q9NUM4	274 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	PPP1R3C	Q9UQK1	317 aa		13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.57	□□□□□ -0.24
SGCE-208	ENST00000450385	TCRBV5S2	A0A599	114 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	IQCF6	A8MYZ5	107 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	BHLHE40	O14503	412 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	FOXH1	O75593	365 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	RAP2A	P10114	183 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	SRP9	P49458	86 aa	Known RBP	13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	TPTE	P56180	551 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	MALL	Q13021	153 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	ZNF181	Q2M3W8	571 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	OR2T5	Q6IEZ7	315 aa		13.56	□□□□□ -0.24
SGCE-208	ENST00000450385	SHQ1	Q6PI26	577 aa	Known RBP	13.56	□□□□□ -0.24

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