RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ELFN2Q5R3F8 820 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 SHEQ5VZ18 495 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 FAM57BQ71RH2 274 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 TMEM52Q8NDY8 209 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 RSC1A1Q92681 617 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 TMEM59Q9BXS4 323 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 C11orf49Q9H6J7 331 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 CHST11Q9NPF2 352 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 OTOL1A6NHN0 477 aaPredicted RBP11.21□□□□□ -0.62
UBE3B-204ENST00000449510 LINC00587B1AMM8 73 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 FKTNO75072 461 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 AQP8O94778 261 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 SLC34A2O95436 690 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 TNFP01375 233 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 HERV-K104P61576 105 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 EEF1A1P68104 462 aaKnown RBP11.21□□□□□ -0.62
UBE3B-204ENST00000449510 FMODQ06828 376 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 ANKRD16Q6P6B7 361 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 Q6ZSR6 202 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 LYG2Q86SG7 212 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 CA5BP1Q8WTZ4 195 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 PHYHIPQ92561 330 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 SSX3Q99909 188 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 SUCNR1Q9BXA5 334 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 SEMA6CQ9H3T2 930 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 EXOSC3Q9NQT5 275 aaKnown RBP11.21□□□□□ -0.62
UBE3B-204ENST00000449510 GHRLQ9UBU3 117 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 KCNE5Q9UJ90 142 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 SLC22A7Q9Y694 548 aa11.21□□□□□ -0.62
UBE3B-204ENST00000449510 IGHV3-20A0A0C4DH32 117 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 A0A1W2PPH5 198 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 PGCP20142 388 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 C5AR1P21730 350 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 GALP22466 123 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 ACSM1Q08AH1 577 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 GPM6BQ13491 265 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 RAB32Q13637 225 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 AGBL4Q5VU57 503 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 OVCH2Q7RTZ1 564 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 ADAD2Q8NCV1 583 aaKnown RBP11.2□□□□□ -0.62
UBE3B-204ENST00000449510 NPEPL1Q8NDH3 523 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 LMX1AQ8TE12 382 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 POLE3Q9NRF9 147 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 HSPB6O14558 160 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 CEACAM5P06731 702 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 FCGR2CP31995 323 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 INPP5JQ15735 1006 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-204ENST00000449510 HFEQ30201 348 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 EEF1A1P5Q5VTE0 462 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 ADAMTSL4Q6UY14 1074 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 OR51E1Q8TCB6 317 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 PIGTQ969N2 578 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 ARL5BQ96KC2 179 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 AMELYQ99218 206 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 PBDC1Q9BVG4 233 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 TMPRSS13Q9BYE2 586 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 RASL12Q9NYN1 266 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 MRPS28Q9Y2Q9 187 aaKnown RBP11.2□□□□□ -0.62
UBE3B-204ENST00000449510 UBE2J1Q9Y385 318 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-204ENST00000449510 PDCD11Q14690 1871 aaKnown RBP11.2□□□□□ -0.62
UBE3B-204ENST00000449510 ASXL3Q9C0F0 2248 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 SEC14L5O43304 696 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 NGFRP08138 427 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 FGF2P09038 288 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 RCC1P18754 421 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-204ENST00000449510 GLRA1P23415 457 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 TAGLN2P37802 199 aaKnown RBP11.2□□□□□ -0.62
UBE3B-204ENST00000449510 IDH3GP51553 393 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-204ENST00000449510 TMEM244Q5VVB8 128 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 OR2L13Q8N349 312 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 HPSE2Q8WWQ2 592 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 SPSB2Q99619 263 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 ABHD6Q9BV23 337 aa11.2□□□□□ -0.62
UBE3B-204ENST00000449510 ICE1Q9Y2F5 2266 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 A0A0U1RQK1 487 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 C17orf51A8MQB3 221 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 SLC17A2O00624 439 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 GLP1RP43220 463 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 TSFMP43897 325 aaKnown RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 KIR2DS3Q14952 304 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 PDCD1Q15116 288 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 PPA1Q15181 289 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 OGFOD3Q6PK18 319 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 TMEM182Q6ZP80 229 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 MISPQ8IVT2 679 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 LRRC18Q8N456 261 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ADAMTS18Q8TE60 1221 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 SGK3Q96BR1 496 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 RBM24Q9BX46 236 aaKnown RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 RAB33BQ9H082 229 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ZNF442Q9H7R0 627 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 CTSFQ9UBX1 484 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 DNASE2O00115 360 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 GSTZ1O43708 216 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 OR2C1O95371 312 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 UTS2O95399 124 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 HPP00738 406 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 PTAFRP25105 342 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms