RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 CELA3BP08861 270 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 HTR1AP08908 422 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 STOMP27105 288 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 APEX1P27695 318 aaKnown RBP12.72□□□□□ -0.37
SHANK2-210ENST00000449116 APLNRP35414 380 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF83P51522 516 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 IRF3Q14653 427 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF684Q5T5D7 378 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF773Q6PK81 442 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 SEZ6L2Q6UXD5 910 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 TMPRSS11AQ6ZMR5 421 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 PLEKHG7Q6ZR37 379 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 FAM220AQ7Z4H9 259 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-210ENST00000449116 EGFL6Q8IUX8 553 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 SYS1Q8N2H4 156 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 SLC30A7Q8NEW0 376 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 SPTSSAQ969W0 71 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 DACH2Q96NX9 599 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 KCNJ15Q99712 375 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 ELOVL3Q9HB03 270 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 NGBQ9NPG2 151 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 CAB39Q9Y376 341 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-210ENST00000449116 LRP12Q9Y561 859 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 SNX5Q9Y5X3 404 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 SPTBN1Q01082 2364 aaKnown RBP12.72□□□□□ -0.37
SHANK2-210ENST00000449116 HCFC1P51610 2035 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 USP9XQ93008 2570 aaPredicted RBP12.71□□□□□ -0.37
SHANK2-210ENST00000449116 IGHV1-18A0A0C4DH31 117 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 TMEM129A0AVI4 362 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 METTL15A6NJ78 407 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 M0R1B8 84 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 MAGEB4O15481 346 aaPredicted RBP12.71□□□□□ -0.37
SHANK2-210ENST00000449116 ABHD16AO95870 558 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 TACSTD2P09758 323 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 CECR9P0C854 216 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 IGFBP2P18065 325 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 CRYGSP22914 178 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 HSD11B1P28845 292 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 GDI2P50395 445 aaKnown RBP12.71□□□□□ -0.37
SHANK2-210ENST00000449116 RIDAP52758 137 aaKnown RBP12.71□□□□□ -0.37
SHANK2-210ENST00000449116 CDH15P55291 814 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 TBC1D28Q2M2D7 210 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 KRTAP27-1Q3LI81 207 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 TP53I3Q53FA7 332 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 KCTD20Q7Z5Y7 419 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 MYPOPQ86VE0 399 aaPredicted RBP12.71□□□□□ -0.37
SHANK2-210ENST00000449116 YIPF7Q8N8F6 280 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 OR1J2Q8NGS2 313 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 OR52N1Q8NH53 320 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 C4orf36Q96KX1 117 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 MND1Q9BWT6 205 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 NIPAL2Q9H841 368 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 GNG8Q9UK08 70 aa12.71□□□□□ -0.37
SHANK2-210ENST00000449116 LOC100509620A0A075B734 347 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 C5orf49A4QMS7 147 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 F5H5K5 113 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 J3QLW9 94 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 MT-ND5P03915 603 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 DBHP09172 617 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 ZNF19P17023 458 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 OTX1P32242 354 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-210ENST00000449116 DCTDP32321 178 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 OR12D2P58182 307 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 GALK2Q01415 458 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 TBCEQ15813 527 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-210ENST00000449116 OR2G6Q5TZ20 316 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 SPARTQ8N0X7 666 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 SVOPQ8N4V2 548 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 NANOGP1Q8N7R0 232 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 IL17RDQ8NFM7 739 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 TSPAN14Q8NG11 270 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 SPRYD4Q8WW59 207 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-210ENST00000449116 SLC7A6Q92536 515 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 POM121L2Q96KW2 1035 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 DCLRE1CQ96SD1 692 aaKnown RBP12.7□□□□□ -0.38
SHANK2-210ENST00000449116 ISG20L2Q9H9L3 353 aaKnown RBP12.7□□□□□ -0.38
SHANK2-210ENST00000449116 ACOXLQ9NUZ1 547 aa12.7□□□□□ -0.38
SHANK2-210ENST00000449116 FLNCQ14315 2725 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 A0A087WXM4 84 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 MAGEA13PA6NCF6 341 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 PRSS44E7EML9 344 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 M0R135 149 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 CASKO14936 926 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 APOC1P02654 83 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 EPXP11678 715 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 CCL2P13500 99 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 CCNOP22674 350 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 PTAFRP25105 342 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 CX3CR1P49238 355 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 PRKXP51817 358 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 TPTEP56180 551 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 WNT4P56705 351 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 PSMA6P60900 246 aaKnown RBP12.69□□□□□ -0.38
SHANK2-210ENST00000449116 NAAAQ02083 359 aa12.69□□□□□ -0.38
SHANK2-210ENST00000449116 MRPL28Q13084 256 aaKnown RBP12.69□□□□□ -0.38
SHANK2-210ENST00000449116 RSPO1Q2MKA7 263 aaPredicted RBP12.69□□□□□ -0.38
SHANK2-210ENST00000449116 ZNF829Q3KNS6 432 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms