RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 C2orf66Q6UXQ4 117 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 COX15Q7KZN9 410 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 DCXRQ7Z4W1 244 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 MRPL55Q7Z7F7 128 aaKnown RBP2.97□□□□□ -1.93
PMS1-216ENST00000447734 SLC7A5P1Q8MH63 180 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 ARRDC1Q8N5I2 433 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 ATP6V1C2Q8NEY4 427 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 OR2Y1Q8NGV0 311 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 DOK4Q8TEW6 326 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 PHF10Q8WUB8 498 aaKnown RBP2.97□□□□□ -1.93
PMS1-216ENST00000447734 DNASE2BQ8WZ79 361 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 CHMP6Q96FZ7 201 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 SMIM10Q96HG1 83 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 ADTRPQ96IZ2 230 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 FGFBP2Q9BYJ0 223 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 SHCBP1LQ9BZQ2 653 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 ADNPQ9H2P0 1102 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 HEXA-AS1Q9H8Q6 139 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 REEP1Q9H902 201 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 ISYNA1Q9NPH2 558 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 ABCB10Q9NRK6 738 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 C1orf109Q9NX04 203 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 CES1P1Q9UKY3 287 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 ASF1AQ9Y294 204 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 FLVCR1Q9Y5Y0 555 aa2.97□□□□□ -1.93
PMS1-216ENST00000447734 MAPK8IP3Q9UPT6 1336 aa2.96□□□□□ -1.93
PMS1-216ENST00000447734 FHOD3Q2V2M9 1422 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 INSIG1O15503 277 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 ZNF253O75346 499 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 CRLF1O75462 422 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 AMBPP02760 352 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 CCDC166P0CW27 439 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 SNHG28P0DPA3 235 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 LIPCP11150 499 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 GNRHRP30968 328 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 HOXA6P31267 233 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 HOXA9P31269 272 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 MAGEA2P43356 314 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 MAGEA3P43357 314 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 RND2P52198 227 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 APOC4P55056 127 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 DLX1P56177 255 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 ZNF121P58317 390 aaPredicted RBP2.96□□□□□ -1.94
PMS1-216ENST00000447734 PRPS1P60891 318 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 BASP1P80723 227 aaKnown RBP2.96□□□□□ -1.94
PMS1-216ENST00000447734 STX4Q12846 297 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 MADCAM1Q13477 382 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 RUNX3Q13761 415 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 FLOT2Q14254 428 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 SLC1A5Q15758 541 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 RGS21Q2M5E4 152 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 BSXQ3C1V8 233 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 TMEM30BQ3MIR4 351 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 C2CD6Q53TS8 623 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 RBM48Q5RL73 367 aaKnown RBP2.96□□□□□ -1.94
PMS1-216ENST00000447734 KHDRBS2Q5VWX1 349 aaKnown RBP2.96□□□□□ -1.94
PMS1-216ENST00000447734 FRMPD2BQ6IN97 320 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 USP43Q70EL4 1123 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 PAGE2Q7Z2X7 111 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 ZNF589Q86UQ0 364 aaPredicted RBP2.96□□□□□ -1.94
PMS1-216ENST00000447734 THOC6Q86W42 341 aaKnown RBP2.96□□□□□ -1.94
PMS1-216ENST00000447734 RALGPS2Q86X27 583 aaPredicted RBP2.96□□□□□ -1.94
PMS1-216ENST00000447734 TMEM25Q86YD3 366 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 CA13Q8N1Q1 262 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 CBR4Q8N4T8 237 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 TMEM252Q8N6L7 170 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 ZFP41Q8N8Y5 198 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 CSNK1G2-AS1Q8NCQ2 148 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 OR52E2Q8NGJ4 325 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 OR6Q1Q8NGQ2 317 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 FANK1Q8TC84 345 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 RORBQ92753 470 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 FBXO17Q96EF6 278 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 RBBP8Q99708 897 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 APOL2Q9BQE5 337 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 ING2Q9H160 280 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 PORCNQ9H237 461 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 SRMSQ9H3Y6 488 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 PLGRKTQ9HBL7 147 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 SDF2L1Q9HCN8 221 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 IFT46Q9NQC8 304 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.96□□□□□ -1.94
PMS1-216ENST00000447734 XCL2Q9UBD3 114 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 ST3GAL6Q9Y274 331 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 CFL2Q9Y281 166 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 OR51B2Q9Y5P1 312 aa2.96□□□□□ -1.94
PMS1-216ENST00000447734 POLR3AO14802 1390 aaPredicted RBP2.96□□□□□ -1.94
PMS1-216ENST00000447734 RAD50Q92878 1312 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 GOLGA8IPA6NC78 632 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 GOLGA8JA6NMD2 632 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 GOLGA8KD6RF30 607 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 GOLGA8MH3BSY2 632 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 LYPLA1O75608 230 aaPredicted RBP2.95□□□□□ -1.94
PMS1-216ENST00000447734 VENTXO95231 258 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 SNAPINO95295 136 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 UTS2O95399 124 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 DEXIO95424 95 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 NTN1O95631 604 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 PTTG1O95997 202 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 HPNP05981 417 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms