RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 LINC01590Q5TEZ4 76 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 MBNL2Q5VZF2 373 aaKnown RBP12.67□□□□□ -0.38
HDAC4-204ENST00000446876 OR10S1Q8NGN2 331 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 UBASH3BQ8TF42 649 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 SNX33Q8WV41 574 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 COQ7Q99807 217 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 PIMREGQ9BSJ6 248 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 MS4A5Q9H3V2 200 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 HINT3Q9NQE9 182 aaKnown RBP12.67□□□□□ -0.38
HDAC4-204ENST00000446876 PAPOLBQ9NRJ5 636 aaKnown RBP12.67□□□□□ -0.38
HDAC4-204ENST00000446876 TBCCD1Q9NVR7 557 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 SLCO1C1Q9NYB5 712 aa12.67□□□□□ -0.38
HDAC4-204ENST00000446876 LOC390937A0A1W2PQ73 354 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 C17orf100A8MU93 164 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 VWC2LB2RUY7 222 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 SURF4O15260 269 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 SPARCP09486 303 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 SLC25A16P16260 332 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 FMO3P31513 532 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 ENTPD1P49961 510 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 CDK5Q00535 292 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 GGTLC2Q14390 218 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 PLBD1Q6P4A8 553 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 ARL9Q6T311 187 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 UNQ6126/PRO20091Q6UXV3 157 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 ATF6BQ99941 703 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 BPESC1Q9GZL8 116 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 SLC25A19Q9HC21 320 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 MYOZ1Q9NP98 299 aaPredicted RBP12.66□□□□□ -0.38
HDAC4-204ENST00000446876 PTTG3PQ9NZH4 202 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 ATPIF1Q9UII2 106 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 KCNG2Q9UJ96 466 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 TLN2Q9Y4G6 2542 aa12.66□□□□□ -0.38
HDAC4-204ENST00000446876 ABCA1O95477 2261 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 ZSCAN5BA6NJL1 495 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 SAC3D1A6NKF1 404 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 F5H5K5 113 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 G3V2T6 193 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 M0R129 80 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 SPRY3O43610 288 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 FCGR1AP12314 374 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 ANOS1P23352 680 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 COL8A2P25067 703 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 NR4A2P43354 598 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 MMP15P51511 669 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 CRISP1P54107 249 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 PRSS12P56730 875 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 ACTR3P61158 418 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 CCL8P80075 99 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 PSG7Q13046 419 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 HLXQ14774 488 aaPredicted RBP12.65□□□□□ -0.38
HDAC4-204ENST00000446876 TSTQ16762 297 aaKnown RBP12.65□□□□□ -0.38
HDAC4-204ENST00000446876 KRTAP27-1Q3LI81 207 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 SPATC1Q76KD6 591 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 DCXRQ7Z4W1 244 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 NAA40Q86UY6 237 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 HIPK1Q86Z02 1210 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 ZNF786Q8N393 782 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 BBS1Q8NFJ9 593 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 PTP4A1Q93096 173 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 YIPF5Q969M3 257 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 GABARAPL1Q9H0R8 117 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 MSL2Q9HCI7 577 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 KRT84Q9NSB2 600 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 GPR160Q9UJ42 338 aa12.65□□□□□ -0.38
HDAC4-204ENST00000446876 IGHV4-61A0A0C4DH41 118 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 PRR23D1E9PI22 279 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 H3BNX3 289 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 H3BSA7 217 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 NDUFS8O00217 210 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 ZNF593O00488 134 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 TIMM8AO60220 97 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 CDC14BO60729 498 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 ACSM4P0C7M7 580 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 PRR23D2P0DMB1 279 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 PAICSP22234 425 aaKnown RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 USF1P22415 310 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 EPHA2P29317 976 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 GSTT1P30711 240 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 ZNF81P51508 661 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 LOXL1Q08397 574 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 HNRNPA0Q13151 305 aaKnown RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 KLHL12Q53G59 568 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 ZDHHC13Q8IUH4 622 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 ERI1Q8IV48 349 aaKnown RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 CPOQ8IVL8 374 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 OR6N2Q8NGY6 317 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 DNAJC9Q8WXX5 260 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 CMBLQ96DG6 245 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 ZMYND19Q96E35 227 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 DCLRE1CQ96SD1 692 aaKnown RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 PKP2Q99959 881 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 TVP23BQ9NYZ1 205 aa12.64□□□□□ -0.39
HDAC4-204ENST00000446876 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 PURGQ9UJV8 347 aaKnown RBP12.64□□□□□ -0.39
HDAC4-204ENST00000446876 OAZ3Q9UMX2 235 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms