RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 KDF1Q8NAX2 398 aaPredicted RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 Q96M85 177 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 WDR54Q9H977 334 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 B4E171 279 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SORBS2O94875 1100 aaKnown RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 TRMT12Q53H54 448 aaKnown RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 FAM209AQ5JX71 171 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 GLYATL3Q5SZD4 288 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 OR2A1Q8NGT9 310 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 OR51F2Q8NH61 342 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SP7Q8TDD2 431 aaPredicted RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 GINS3Q9BRX5 216 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 CHST6Q9GZX3 395 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 RBMX2Q9Y388 322 aaKnown RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 AGAP14A8MT82 685 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 DHHO43323 396 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 DNPH1O43598 174 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SNCGO76070 127 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 GP1BAP07359 652 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SRP14P37108 136 aaKnown RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 CCR2P41597 374 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 GSG1Q2KHT4 349 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SYT6Q5T7P8 510 aaPredicted RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 DEGS2Q6QHC5 323 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF620Q6ZNG0 422 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 C17orf78Q8N4C9 275 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 OR1M1Q8NGA1 313 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF764Q96H86 408 aaPredicted RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 CNTNAP3Q9BZ76 1288 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 EXOSC3Q9NQT5 275 aaKnown RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 LPAR3Q9UBY5 353 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SEC16AO15027 2179 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 A0A1B0GTQ1 180 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 CXCL13O43927 109 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 MRPL19P49406 292 aaKnown RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 EDDM3AQ14507 147 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 GLIPR1L1Q6UWM5 242 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 COMTD1Q86VU5 262 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SKA3Q8IX90 412 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 TCTEX1D2Q8WW35 142 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 RND1Q92730 232 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 AMBRA1Q9C0C7 1298 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 GNB4Q9HAV0 340 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 HES4Q9HCC6 221 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SERTAD4Q9NUC0 356 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 DOCK3Q8IZD9 2030 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 OR5H15A6NDH6 313 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 OR5H14A6NHG9 310 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 OR5H1A6NKK0 313 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 CTSLP07711 333 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 TRIM23P36406 574 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 TMPRSS3P57727 454 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 BAXQ07812 192 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SQSTM1Q13501 440 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 FAM162BQ5T6X4 162 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 SLC38A9Q8NBW4 561 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 NDUFB11Q9NX14 153 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 FAM53CQ9NYF3 392 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 TUBGCP6Q96RT7 1819 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 F8W036 122 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 I6L893 689 aaPredicted RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 J3KTA2 159 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 CT45A10P0DMU9 189 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 RAB7AP51149 207 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 DAPP51397 102 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 PRRX1P54821 245 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 GNG3P63215 75 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 ZXDAP98168 799 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 ACKR1Q16570 336 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 ACER2Q5QJU3 275 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 COX20Q5RI15 118 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 LINC00346Q8IVM7 164 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 TMEM130Q8N3G9 435 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 TAAR5O14804 337 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 ARPC5O15511 151 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 KCNJ3P48549 501 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 LSAMPQ13449 338 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 PRAMEF5Q5TYX0 476 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 PRAMEF6Q5VXH4 476 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 ETFRF1Q6IPR1 90 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 ACSM5Q6NUN0 579 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 MFRPQ9BY79 579 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 THYN1Q9P016 225 aa7.76□□□□□ -1.17
PTPN3-204ENST00000446349 YBX2Q9Y2T7 364 aaKnown RBP7.76□□□□□ -1.17
PTPN3-204ENST00000446349 NUDT19A8MXV4 375 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 H3BMQ9 156 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 HLA-DOBP13765 273 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 GFERP55789 205 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 GUSBP11Q6P575 273 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 DRAM2Q6UX65 266 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 BBS1Q8NFJ9 593 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 HSD17B8Q92506 261 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF775Q96BV0 537 aaPredicted RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 COMMD5Q9GZQ3 224 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 SLCO1B1Q9Y6L6 691 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TDRD6O60522 2096 aaKnown RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PHF1O43189 567 aaPredicted RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 MEOX1P50221 254 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PXDC1Q5TGL8 231 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms