RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 TMEM181Q9P2C4 612 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 MUTYHQ9UIF7 546 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 JPT1Q9UK76 154 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 PILRBQ9UKJ0 227 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 LOC110117498-PIK3R3F6TDL0 507 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ARPC2O15144 300 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 CDC40O60508 579 aaKnown RBP eCLIP3.39□□□□□ -1.87
UBR3-206ENST00000444475 NDUFB4O95168 129 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 CRYGDP07320 174 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 C4BPBP20851 252 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 CEACAM8P31997 349 aaPredicted RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 XCR1P46094 333 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 RPL31P62899 125 aaKnown RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 GUSBP1Q15486 140 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ANXA2RQ3ZCQ2 193 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 TIGITQ495A1 244 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 C14orf28Q4W4Y0 310 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 B3GNTL1Q67FW5 361 aaPredicted RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 COMMD2Q86X83 199 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 LRTM2Q8N967 370 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ACVR1CQ8NER5 493 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 OR5R1Q8NH85 324 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ZPLD1Q8TCW7 415 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 RNF128Q8TEB7 428 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 TCEAL3Q969E4 200 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 PYURFQ96I23 114 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 MS4A8Q9BY19 250 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 TMEM138Q9NPI0 162 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 RASL12Q9NYN1 266 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 Q9UF83 564 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 SNX11Q9Y5W9 270 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 PRSS21Q9Y6M0 314 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ADAMTS7Q9UKP4 1686 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 MYH3P11055 1940 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 FAM187AA6NFU0 413 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 LILRA5A6NI73 299 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 GPR31O00270 319 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 SLC16A7O60669 478 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 SULT1C4O75897 302 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 MAKP20794 623 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 HMGB2P26583 209 aaKnown RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 AKR1C3P42330 323 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 CDH11P55287 796 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 CTSWP56202 376 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 TAS2R31P59538 309 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 MPPED2Q15777 294 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ZNF630Q2M218 657 aaPredicted RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 SPNS3Q6ZMD2 512 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 Q6ZWC4 215 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 SLC47A2Q86VL8 602 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ARRDC1Q8N5I2 433 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 SUMF1Q8NBK3 374 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 RELL2Q8NC24 303 aaPredicted RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 OR4X1Q8NH49 305 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 DLX4Q92988 240 aaPredicted RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 OXGR1Q96P68 337 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 PFDN5Q99471 154 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 NKX3-1Q99801 234 aaPredicted RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 AIF1LQ9BQI0 150 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 ASIC5Q9NY37 505 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 KLRF1Q9NZS2 232 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 RNF181Q9P0P0 153 aa3.39□□□□□ -1.87
UBR3-206ENST00000444475 PLEKHB1Q9UF11 243 aaPredicted RBP3.39□□□□□ -1.87
UBR3-206ENST00000444475 CACNA1SQ13698 1873 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 VWC2LB2RUY7 222 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 BHLHE40O14503 412 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 RRHO14718 337 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 DCTN3O75935 186 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 S1PR2O95136 353 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 IGSF6O95976 241 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 CXCR1P25024 350 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 NTSP30990 170 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 OR3A2P47893 321 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 ZFP36L2P47974 494 aaKnown RBP3.38□□□□□ -1.87
UBR3-206ENST00000444475 SMCPP49901 116 aaPredicted RBP3.38□□□□□ -1.87
UBR3-206ENST00000444475 IFITM2Q01629 132 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 CD164Q04900 197 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 GTF2H2Q13888 395 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 DUSP7Q16829 419 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 PHLDA2Q53GA4 152 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 CPTPQ5TA50 214 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 GTF2H2CQ6P1K8 395 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 MBOAT2Q6ZWT7 520 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 SFTPA1Q8IWL2 248 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 OR2Z1Q8NG97 314 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 OR5M9Q8NGP3 310 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 OR6K6Q8NGW6 343 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 ASB17Q8WXJ9 295 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 TSACCQ96A04 125 aaPredicted RBP3.38□□□□□ -1.87
UBR3-206ENST00000444475 PCED1BQ96HM7 432 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 ZNF681Q96N22 645 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 ZNF641Q96N77 438 aaPredicted RBP3.38□□□□□ -1.87
UBR3-206ENST00000444475 EBF4Q9BQW3 602 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 TMEM208Q9BTX3 173 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 FKRPQ9H9S5 495 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 NOP53Q9NZM5 478 aaKnown RBP3.38□□□□□ -1.87
UBR3-206ENST00000444475 KCNE5Q9UJ90 142 aa3.38□□□□□ -1.87
UBR3-206ENST00000444475 LSM7Q9UK45 103 aaKnown RBP3.38□□□□□ -1.87
UBR3-206ENST00000444475 WDR17Q8IZU2 1322 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms