RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 HMGA2P52926 109 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 PSMA6P60900 246 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 AGAP6Q5VW22 663 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 MRPL14Q6P1L8 145 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 PHYHIPQ92561 330 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 MUL1Q969V5 352 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 APOBEC3DQ96AK3 386 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 ABHD6Q9BV23 337 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 PTTG3PQ9NZH4 202 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 NPAP1Q9NZP6 1156 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 FXYD6-FXYD2A0A087WZ82 144 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 TMEM129A0AVI4 362 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 PIPP12273 146 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 IL2RGP31785 369 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 RPS25P62851 125 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 PYHIN1Q6K0P9 492 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 OR6Q1Q8NGQ2 317 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 OR1F12Q8NHA8 337 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 MCHR2Q969V1 340 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 FXYD6Q9H0Q3 95 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 NUDT15Q9NV35 164 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 HMX3A6NHT5 357 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 SCG5P05408 212 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 HTR2CP28335 458 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 UGT2B10P36537 528 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 RBM39Q14498 530 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 PLPPR5Q32ZL2 321 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 C1orf87Q8N0U7 546 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 OR6X1Q8NH79 312 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 KCNG3Q8TAE7 436 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 THAP6Q8TBB0 222 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 SYNPRQ8TBG9 265 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 DEDD2Q8WXF8 326 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 CTHRC1Q96CG8 243 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 GPR84Q9NQS5 396 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 SULT1C4O75897 302 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 PMS2P2O95744 297 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 ABHD3Q8WU67 409 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 SIGLEC11Q96RL6 698 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 OR10A4Q9H209 315 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 NTN4Q9HB63 628 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 PARD6AQ9NPB6 346 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 WDR1O75083 606 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 ACTL6BO94805 426 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 SLC17A1Q14916 467 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 C1orf185Q5T7R7 199 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 ASCL5Q7RTU5 278 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 FJX1Q86VR8 437 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 SYS1Q8N2H4 156 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 OR4Q3Q8NH05 313 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 IL1F10Q8WWZ1 152 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 ST6GALNAC5Q9BVH7 336 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 HES7Q9BYE0 225 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 GPR173Q9NS66 373 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 KLK13Q9UKR3 277 aa12.61□□□□□ -0.39
SMARCA4-204ENST00000444061 hCG_1809904A0A1W2PP81 198 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 A0A1W2PPE2 198 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 A0A1W2PR64 198 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 A0A1W2PRV1 198 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 HLA-HP01893 362 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 FAM87AP0C7U9 286 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 SLC25A1P53007 311 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 SNTB2Q13425 540 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 NKAIN3Q8N8D7 197 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 H1FXQ92522 213 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 SDK2Q58EX2 2172 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 ARPC4-TTLL3A0A0A6YYG9 625 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 IGKV3-11P04433 115 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 EPHA2P29317 976 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 PMPCAQ10713 525 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 KCNJ8Q15842 424 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 RTL6Q6ICC9 239 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 A6NIN4 97 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 AQP7P3A6NL99 342 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 TP53P04637 393 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 SNRPD2P62316 118 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 LTBQ06643 244 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 RAB35Q15286 201 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 TMEM81Q6P7N7 255 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 HAGHLQ6PII5 290 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 TSPAN32Q96QS1 320 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 UCN2Q96RP3 112 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 DCLRE1CQ96SD1 692 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 POLDIP2Q9Y2S7 368 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 TSC2P49815 1807 aa12.6□□□□□ -0.39
SMARCA4-204ENST00000444061 CENPVL1A0A0U1RR11 272 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ZNF780AO75290 641 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 PEX14O75381 377 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 IL1AP01583 271 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ALDH3B2P48448 385 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 RBP2P50120 134 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 CCDC58Q4VC31 144 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 C10orf111Q8N326 155 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 FLVCR1-AS1Q8TAF5 88 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 REEP6Q96HR9 211 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 GMPPAQ96IJ6 420 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ZNF285Q96NJ3 590 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms