RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SYT3Q9BQG1 590 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 OR51V1Q9H2C8 321 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 OR51B6Q9H340 312 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 MED20Q9H944 212 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 WDR76Q9H967 626 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 DYNLRB1Q9NP97 96 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 MYOZ1Q9NP98 299 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 PNRC2Q9NPJ4 139 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 DDX28Q9NUL7 540 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 DUSP13Q9UII6 198 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 GRIP1Q9Y3R0 1128 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 NGFP01138 241 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 CD99P14209 185 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 SLC2A5P22732 501 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 EPHA2P29317 976 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 GSTT1P30711 240 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 ALDH3A2P51648 485 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 RAD23AP54725 363 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 EFNB1P98172 346 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 LYPD4Q6UWN0 246 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 RFPL4BQ6ZWI9 263 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 LRP11Q86VZ4 500 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 KLF14Q8TD94 323 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 C9orf16Q9BUW7 83 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 OR2J1Q9GZK6 312 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 DLL4Q9NR61 685 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 CGGBP1Q9UFW8 167 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 ORC6Q9Y5N6 252 aa12.89□□□□□ -0.35
CSNK1E-210ENST00000442216 F8P00451 2351 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 A0A1W2PPW3 197 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 EI24O14681 340 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 SSX4O60224 188 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 CLPTM1O96005 669 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 ADRA2AP08913 450 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 DBHP09172 617 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 SPARCP09486 303 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 OTX1P32242 354 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 LIPAP38571 399 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 RSPO1Q2MKA7 263 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 COLCA1Q6ZS62 124 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 DCXRQ7Z4W1 244 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 ERI1Q8IV48 349 aaKnown RBP12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 TIGD4Q8IY51 512 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 OR10S1Q8NGN2 331 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 ST7LQ8TDW4 575 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 SNX33Q8WV41 574 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 SPTSSAQ969W0 71 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 CYSLTR2Q9NS75 346 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 TAAR3PQ9P1P4 343 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 MYEF2Q9P2K5 600 aaKnown RBP12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 FZR1Q9UM11 496 aa12.88□□□□□ -0.35
CSNK1E-210ENST00000442216 ZNF878C9JN71 531 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 PRKYO43930 277 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 MT-ND5P03915 603 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 ACSM4P0C7M7 580 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 RPS27P42677 84 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 TPTEP56180 551 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 NKPD1Q17RQ9 610 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 LCN1P1Q5VSP4 162 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 NXNL2Q5VZ03 156 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 TMEM154Q6P9G4 183 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 CLEC2AQ6UVW9 174 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 DPY19L4Q7Z388 723 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 LURAP1LQ8IV03 231 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 ZNF454Q8N9F8 522 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 OR6N2Q8NGY6 317 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 TMEM163Q8TC26 289 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 SLAMF6Q96DU3 332 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 ZMYND19Q96E35 227 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 TEAD3Q99594 435 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 RHNO1Q9BSD3 238 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 C1QTNF5Q9BXJ0 243 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 TOR3AQ9H497 397 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 RIBC2Q9H4K1 309 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 NKIRAS2Q9NYR9 191 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 H2AFY2Q9P0M6 372 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 STARD10Q9Y365 291 aa12.87□□□□□ -0.35
CSNK1E-210ENST00000442216 AKAP9Q99996 3911 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 C17orf100A8MU93 164 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 F5H5K5 113 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 M0R135 149 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 NDUFS8O00217 210 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 TLX2O43763 284 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 PSKH1P11801 424 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 RAC2P15153 192 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 KITLGP21583 273 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 MPV17P39210 176 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 ALDH3B1P43353 468 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 SLC15A1P46059 708 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 RPS7P62081 194 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 GRB2P62993 217 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 TNK1Q13470 666 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 APOFQ13790 326 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 PCGF3Q3KNV8 242 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 SPATA46Q5T0L3 261 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms