RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 TMEM235A6NFC5 223 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 ADAM11O75078 769 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 NRASP01111 189 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 POU2F2P09086 479 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 TBXA2RP21731 343 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 SDHAP31040 664 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 PGGT1BP53609 377 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 CLDN12P56749 244 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 SMIM21Q3B7S5 101 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 TMEM97Q5BJF2 176 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 MORN1Q5T089 497 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 ETFRF1Q6IPR1 90 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 PLPP7Q8NBV4 271 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 FAM71CQ8NEG0 241 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 MVB12AQ96EY5 273 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 INSM2Q96T92 566 aaPredicted RBP6.11□□□□□ -1.43
USP46-201ENST00000441222 NIT2Q9NQR4 276 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 CXXC1Q9P0U4 656 aaPredicted RBP6.11□□□□□ -1.43
USP46-201ENST00000441222 ATP23Q9Y6H3 246 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 SPTBN1Q01082 2364 aaKnown RBP6.11□□□□□ -1.43
USP46-201ENST00000441222 H0YIG0 161 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 SSSCA1O60232 199 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 PPP1CAP62136 330 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 Q1RN00 199 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 NKAIN1Q4KMZ8 207 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 LINC00696Q6ZRV3 163 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 C17orf78Q8N4C9 275 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 ARHGEF39Q8N4T4 335 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 ZNF561Q8N587 486 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 LHX4Q969G2 390 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 C3orf30Q96M34 536 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 C1QTNF3Q9BXJ4 246 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 TIMM9Q9Y5J7 89 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 COX7A2P2O60397 106 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 CRYBA1P05813 215 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 GJA4P35212 333 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 CSNK1G2P78368 415 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 OR2A2Q6IF42 318 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 SSX7Q7RTT5 188 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 OR10AD1Q8NGE0 317 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 OR51S1Q8NGJ8 323 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 LRRC15Q8TF66 581 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 GALMQ96C23 342 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 EGLN2Q96KS0 407 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 PDLIM7Q9NR12 457 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 CHD5Q8TDI0 1954 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 TCAPO15273 167 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 ANKRD34CP0C6C1 535 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 T-ENOLP0DO92 83 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 GLRA1P23415 457 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 LINC00346Q8IVM7 164 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 COMMD1Q8N668 190 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 TM4SF18Q96CE8 201 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 PECRQ9BY49 303 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 SLX4Q8IY92 1834 aa6.11□□□□□ -1.43
USP46-201ENST00000441222 DNAJC25-GNG10A0A024R161 153 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 DCTN6O00399 190 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 TERTO14746 1132 aaKnown RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 RPS16P62249 146 aaKnown RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 METRNLQ641Q3 311 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 OR51H1Q8NH63 302 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ZDHHC5Q9C0B5 715 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 GAREM1Q9H706 876 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 CTSFQ9UBX1 484 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 RFPL4AA6NLU0 287 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 RFPL4AL1F8VTS6 287 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 MGMTP16455 207 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 AQP6Q13520 282 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 MLF2Q15773 248 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 PLA1AQ53H76 456 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 C17orf99Q6UX52 265 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 FA2HQ7L5A8 372 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 LRRTM1Q86UE6 522 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 OLIG1Q8TAK6 271 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 TMEM174Q8WUU8 243 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 TVP23CQ96ET8 276 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 MENTQ9BUN1 341 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ZNF629Q9UEG4 869 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 TEX50A0A1B0GTY4 177 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 I6L893 689 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 M0QYG6 137 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 EDN3P14138 238 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 GPX2P18283 190 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 FCGR2CP31995 323 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 CNN1P51911 297 aaKnown RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 TPPP2P59282 170 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 IGFBP7Q16270 282 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 LRRC26Q2I0M4 334 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 DRAM2Q6UX65 266 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 Q8IYB0 196 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 MORN4Q8NDC4 146 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ZNF384Q8TF68 577 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 SLC39A7Q92504 469 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 BCL2L2Q92843 193 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 RPL3LQ92901 407 aaKnown RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 ELF4Q99607 663 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 UCK1Q9HA47 277 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 HES4Q9HCC6 221 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms