RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 GDPD1Q8N9F7 314 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ATP6V1C2Q8NEY4 427 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR10H4Q8NGA5 316 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR51G2Q8NGK0 314 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR13C2Q8NGS9 318 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR51Q1Q8NH59 317 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR51A7Q8NH64 312 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR5W2Q8NH69 310 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OCC1Q8TAD7 63 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 DNAJA4Q8WW22 397 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SMPDL3BQ92485 455 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 KIAA1143Q96AT1 154 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SGTBQ96EQ0 304 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 DIRAS2Q96HU8 199 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 VSTM2LQ96N03 204 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TGM7Q96PF1 710 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ERMAPQ96PL5 475 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 UHRF2Q96PU4 802 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 DDOQ99489 341 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TEAD3Q99594 435 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SDHCQ99643 169 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF426Q9BUY5 554 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 KATNB1Q9BVA0 655 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMED9Q9BVK6 235 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPRY4Q9C004 299 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SRRQ9GZT4 340 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 RAB33BQ9H082 229 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR51V1Q9H2C8 321 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MIXL1Q9H2W2 232 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 RERGLQ9H628 205 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SYNDIG1Q9H7V2 258 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 UBE2ZQ9H832 354 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MED20Q9H944 212 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ISG20L2Q9H9L3 353 aaKnown RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SEBOXQ9HB31 216 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ABCB9Q9NP78 766 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MMP25Q9NPA2 562 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MEPEQ9NQ76 525 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CMC2Q9NRP2 79 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 PNO1Q9NRX1 252 aaKnown RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CUTCQ9NTM9 273 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 C2orf42Q9NWW7 574 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SOHLH2Q9NX45 425 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 FLRT3Q9NZU0 649 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR14J1Q9UGF5 321 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MUTYHQ9UIF7 546 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 KLHL21Q9UJP4 597 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MRTO4Q9UKD2 239 aaKnown RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ERVK-19Q9WJR5 959 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 YARS2Q9Y2Z4 477 aaKnown RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 GRIP1Q9Y3R0 1128 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR10H1Q9Y4A9 318 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MMACHCQ9Y4U1 282 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM184BQ9Y519 407 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 PCDHGA5Q9Y5G8 931 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLCO1B1Q9Y6L6 691 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 V9GYH0 126 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 COL4A2P08572 1712 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 UTRNP46939 3433 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TRPM6Q9BX84 2022 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TICRRQ7Z2Z1 1910 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TRAV27A0A087WT01 109 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 A0A087WUJ7 227 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGHV5-51A0A0C4DH38 117 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 C2orf92A0A1B0GVN3 265 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CCDC182A6NF36 153 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 A8MUA0 341 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 C17orf105B2RV13 164 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM150CB9EJG8 249 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 LMO7DNF2Z398 122 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 J3QLW9 94 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 IMPA2O14732 288 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ARPC3O15145 178 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 POLR1CO15160 346 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 LRRTM2O43300 516 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 IDH3BO43837 385 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC19A2O60779 497 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR2B3O76000 313 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR7A10O76100 309 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 UTS2O95399 124 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SERPINA3P01011 423 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGF2P01344 180 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CLPSP04118 112 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 MRPL3P09001 348 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CT45A8P0DMV1 189 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CT45A9P0DMV2 189 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGHV4-30-4P0DP06 118 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PNMTP11086 282 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 IL7P13232 177 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 HPGDP15428 266 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF19P17023 458 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC2A5P22732 501 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TCEA1P23193 301 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 LCN1P31025 176 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 RORAP35398 523 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 RPL4P36578 427 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PPICP45877 212 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR1D4P47884 311 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TGM4P49221 684 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 EVX1P49640 407 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms