RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 COX6A1P12074 109 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 DCTDP32321 178 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 SFTPDP35247 375 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 ARHGDIBP52566 201 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 NANOS3P60323 173 aaKnown RBP12.66□□□□□ -0.38
LIMD1-202ENST00000440097 ADAM8P78325 824 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 EXT1Q16394 746 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 H1FNTQ75WM6 255 aaPredicted RBP12.66□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF433Q8N7K0 673 aaPredicted RBP12.66□□□□□ -0.38
LIMD1-202ENST00000440097 OR5M9Q8NGP3 310 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 FCAMRQ8WWV6 532 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 PNPLA2Q96AD5 504 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 PTGES2Q9H7Z7 377 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 MED29Q9NX70 200 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 B9D1Q9UPM9 204 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 KLF2Q9Y5W3 355 aaPredicted RBP12.66□□□□□ -0.38
LIMD1-202ENST00000440097 TMEM14AQ9Y6G1 99 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 HMSDA8MTL9 139 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 SNAPC5O75971 98 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 SPDEFO95238 335 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 HPP00738 406 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 CTLA4P16410 223 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 TCN2P20062 427 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 MSX1P28360 303 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 H2BFSP57053 126 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 FOXK1P85037 733 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 RAB11FIP2Q7L804 512 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 RELL2Q8NC24 303 aaPredicted RBP12.66□□□□□ -0.38
LIMD1-202ENST00000440097 SLC25A38Q96DW6 304 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 OR5B2Q96R09 309 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 STRADBQ9C0K7 418 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 OPN4Q9UHM6 478 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 MRM2Q9UI43 246 aaKnown RBP12.66□□□□□ -0.38
LIMD1-202ENST00000440097 PADI1Q9ULC6 663 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 BOD1L1Q8NFC6 3051 aa12.66□□□□□ -0.38
LIMD1-202ENST00000440097 A0A1B0GTH9 108 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 ANKRD20A5PA0PJZ0 165 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 SNRPGP15A8MWD9 76 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF879B4DU55 563 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 UCHL1P09936 223 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF35P13682 527 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 RPL35P42766 123 aaKnown RBP12.65□□□□□ -0.38
LIMD1-202ENST00000440097 MAP1BP46821 2468 aaKnown RBP12.65□□□□□ -0.38
LIMD1-202ENST00000440097 SOX2P48431 317 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 INSM1Q01101 510 aaPredicted RBP12.65□□□□□ -0.38
LIMD1-202ENST00000440097 MEP1BQ16820 701 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 PLPPR5Q32ZL2 321 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 FCRLAQ7L513 359 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 CDC20BQ86Y33 519 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 EXPH5Q8NEV8 1989 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 MFSD8Q8NHS3 518 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 MRGPRX4Q96LA9 322 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 SLC25A18Q9H1K4 315 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 NOX4Q9NPH5 578 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 ANKRD10Q9NXR5 420 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 CEP250Q9BV73 2442 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 LOC102723996A0A087X1L8 192 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 PMS2P1A4D2B8 440 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 FTCDNL1E5RQL4 147 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 ABCD4O14678 606 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 IL5P05113 134 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 CYC1P08574 325 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 VSIG10L2P0DP72 767 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 AKR1D1P51857 326 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 CLDN12P56749 244 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 UBE2MP61081 183 aaKnown RBP12.65□□□□□ -0.38
LIMD1-202ENST00000440097 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.38
LIMD1-202ENST00000440097 MYBPHQ13203 477 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 OLFML2AQ68BL7 652 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 OR7E24Q6IFN5 339 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 OPN5Q6U736 354 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF676Q8N7Q3 588 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 OR5AK2Q8NH90 309 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 USB1Q9BQ65 265 aaKnown RBP12.65□□□□□ -0.38
LIMD1-202ENST00000440097 EMC6Q9BV81 110 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF281Q9Y2X9 895 aa12.65□□□□□ -0.38
LIMD1-202ENST00000440097 A0A1W2PNR3 127 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 GPRIN2O60269 458 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 RLN2P04090 185 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 ALOX5APP20292 161 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 PTGDSP41222 190 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 PTH2RP49190 550 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 DLX5P56178 289 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 GLO1Q04760 184 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 TOMM20Q15388 145 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 C3orf33Q6P1S2 294 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 GFI1Q99684 422 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF700Q9H0M5 742 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 SCPEP1Q9HB40 452 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 CHST11Q9NPF2 352 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 COA3Q9Y2R0 106 aaPredicted RBP12.64□□□□□ -0.39
LIMD1-202ENST00000440097 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 PYCARD-AS1I3L0S3 204 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 NDUFB6O95139 128 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 DAP3P51398 398 aaKnown RBP12.64□□□□□ -0.39
LIMD1-202ENST00000440097 SSR4P51571 173 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 HSF1Q00613 529 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 FMODQ06828 376 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms