RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 ERVK-16P61578 105 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 CNN3Q15417 329 aaKnown RBP13.37□□□□□ -0.27
PCNX1-202ENST00000439984 DYRK2Q92630 601 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 ZDHHC5Q9C0B5 715 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 MSL2Q9HCI7 577 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 RNF212BA8MTL3 300 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 CLN5O75503 358 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 LIMS3P0CW19 117 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 LIMS4P0CW20 117 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 SLC6A8P48029 635 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 SLC35D3Q5M8T2 416 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 DCXRQ7Z4W1 244 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 NKAIN3Q8N8D7 197 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 MS4A10Q96PG2 267 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 SLC2A9Q9NRM0 540 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 CA10Q9NS85 328 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 NECAP2Q9NVZ3 263 aa13.37□□□□□ -0.27
PCNX1-202ENST00000439984 APBB3O95704 486 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
PCNX1-202ENST00000439984 PMCHP20382 165 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 PPIAP62937 165 aaKnown RBP13.36□□□□□ -0.27
PCNX1-202ENST00000439984 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 ZNF600Q6ZNG1 722 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 TMPPEQ6ZT21 453 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 FLVCR1Q9Y5Y0 555 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 ARID1AO14497 2285 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 NUP205Q92621 2012 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 TOX4O94842 621 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 BTNL8Q6UX41 500 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 ASB13Q8WXK3 278 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 PRDM7Q9NQW5 492 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 CLDND1Q9NY35 253 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 SLC22A13Q9Y226 551 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 PVRP15151 417 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 CXCL2P19875 107 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 OR6K3Q8NGY3 331 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 SEC11CQ9BY50 192 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 C7orf77A4D0Y5 90 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 ZIC2O95409 532 aaPredicted RBP13.36□□□□□ -0.27
PCNX1-202ENST00000439984 ACRP10323 421 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 TIMP2P16035 220 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 RPS21P63220 83 aaKnown RBP13.36□□□□□ -0.27
PCNX1-202ENST00000439984 PPP1R1AQ13522 171 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 ENDOGQ14249 297 aaKnown RBP13.36□□□□□ -0.27
PCNX1-202ENST00000439984 AGERQ15109 404 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 TRIM61Q5EBN2 209 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 PPP1R3BQ86XI6 285 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 OR14J1Q9UGF5 321 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 TMEM151BQ8IW70 566 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 DND1Q8IYX4 353 aaKnown RBP13.36□□□□□ -0.27
PCNX1-202ENST00000439984 SLC35B3Q9H1N7 401 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 AMDHD2Q9Y303 409 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 AKR7A3O95154 331 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 CD14P08571 375 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 DCBLD2Q96PD2 775 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 IER2Q9BTL4 223 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 PLEKHA2Q9HB19 425 aa13.36□□□□□ -0.27
PCNX1-202ENST00000439984 MPC2O95563 127 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 FBLP22087 321 aaKnown RBP13.35□□□□□ -0.27
PCNX1-202ENST00000439984 RPP30P78346 268 aaKnown RBP13.35□□□□□ -0.27
PCNX1-202ENST00000439984 ELFN2Q5R3F8 820 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 EXTL1Q92935 676 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 SLC35D1Q9NTN3 355 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 MTCH1Q9NZJ7 389 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 TRAPPC1Q9Y5R8 145 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 LOC107986453A0A1B0GWG9 222 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 CXorf65A6NEN9 183 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 FCMRO60667 390 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 B3GNTL1Q67FW5 361 aaPredicted RBP13.35□□□□□ -0.27
PCNX1-202ENST00000439984 LHX4Q969G2 390 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 CLSTN3Q9BQT9 956 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 VN1R3Q9BXE9 311 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 OR51M1Q9H341 326 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 GEMIN2O14893 280 aaKnown RBP13.35□□□□□ -0.27
PCNX1-202ENST00000439984 NMBP08949 121 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 DMRTC1Q5HYR2 192 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 SLC24A4Q8NFF2 622 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 CPT1CQ8TCG5 803 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 GPR87Q9BY21 358 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 RNGTTO60942 597 aaKnown RBP13.35□□□□□ -0.27
PCNX1-202ENST00000439984 PLGLB1Q02325 96 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 ELAVL3Q14576 367 aaKnown RBP13.35□□□□□ -0.27
PCNX1-202ENST00000439984 DIO2Q92813 273 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 PHYHIPLQ96FC7 376 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 FER1L6Q2WGJ9 1857 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 PRRC2BQ5JSZ5 2229 aaKnown RBP13.35□□□□□ -0.27
PCNX1-202ENST00000439984 SHROOM3Q8TF72 1996 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 PTP4A3O75365 173 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 HSF1Q00613 529 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 MFSD12Q6NUT3 480 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 GNPNAT1Q96EK6 184 aaPredicted RBP13.35□□□□□ -0.27
PCNX1-202ENST00000439984 SERTAD3Q9UJW9 196 aa13.35□□□□□ -0.27
PCNX1-202ENST00000439984 OR5I1Q13606 314 aa13.34□□□□□ -0.27
PCNX1-202ENST00000439984 DUSP5Q16690 384 aa13.34□□□□□ -0.27
PCNX1-202ENST00000439984 PUSL1Q8N0Z8 303 aaKnown RBP13.34□□□□□ -0.27
PCNX1-202ENST00000439984 RAB33BQ9H082 229 aa13.34□□□□□ -0.27
PCNX1-202ENST00000439984 ADAM29Q9UKF5 820 aa13.34□□□□□ -0.27
PCNX1-202ENST00000439984 MFSD2BA6NFX1 497 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms