RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TMEM154Q6P9G4 183 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 LYPD4Q6UWN0 246 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 SHFQ7M4L6 423 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 DCXRQ7Z4W1 244 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 LRP11Q86VZ4 500 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 TIGD4Q8IY51 512 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 SLC25A40Q8TBP6 338 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 NEU4Q8WWR8 484 aaPredicted RBP10.14□□□□□ -0.79
HSPG2-206ENST00000439717 SLC7A6Q92536 515 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 MAP6Q96JE9 813 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 VRK1Q99986 396 aaPredicted RBP10.14□□□□□ -0.79
HSPG2-206ENST00000439717 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 DDX28Q9NUL7 540 aaKnown RBP10.14□□□□□ -0.79
HSPG2-206ENST00000439717 FZR1Q9UM11 496 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 GRIP1Q9Y3R0 1128 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 A0A1W2PPW3 197 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 PRKYO43930 277 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 SSX4O60224 188 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 BAG2O95816 211 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 CLPTM1O96005 669 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 NGFP01138 241 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 MT-ND5P03915 603 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 ADRA2AP08913 450 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 DBHP09172 617 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 SLC2A5P22732 501 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 TPTEP56180 551 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 CLEC12BQ2HXU8 276 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 RSPO1Q2MKA7 263 aaPredicted RBP10.13□□□□□ -0.79
HSPG2-206ENST00000439717 LCN1P1Q5VSP4 162 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 DNM1P46Q6ZS02 220 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 RHOUQ7L0Q8 258 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 ERI1Q8IV48 349 aaKnown RBP10.13□□□□□ -0.79
HSPG2-206ENST00000439717 CBR4Q8N4T8 237 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 ZNF454Q8N9F8 522 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 OR5L1Q8NGL2 311 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 OR6N2Q8NGY6 317 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 TMEM163Q8TC26 289 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 KLF14Q8TD94 323 aaPredicted RBP10.13□□□□□ -0.79
HSPG2-206ENST00000439717 SPTSSAQ969W0 71 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 APOBEC3DQ96AK3 386 aaPredicted RBP10.13□□□□□ -0.79
HSPG2-206ENST00000439717 SLAMF6Q96DU3 332 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 ZMYND19Q96E35 227 aaPredicted RBP10.13□□□□□ -0.79
HSPG2-206ENST00000439717 Q96MF0 132 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 SORCS2Q96PQ0 1159 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 OR2J1Q9GZK6 312 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 RIBC2Q9H4K1 309 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 MYOZ1Q9NP98 299 aaPredicted RBP10.13□□□□□ -0.79
HSPG2-206ENST00000439717 TAAR3PQ9P1P4 343 aa10.13□□□□□ -0.79
HSPG2-206ENST00000439717 MYEF2Q9P2K5 600 aaKnown RBP10.13□□□□□ -0.79
HSPG2-206ENST00000439717 CGGBP1Q9UFW8 167 aaPredicted RBP10.13□□□□□ -0.79
HSPG2-206ENST00000439717 F5H5K5 113 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 TLX2O43763 284 aaPredicted RBP10.12□□□□□ -0.79
HSPG2-206ENST00000439717 CSF3P09919 207 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 ACSM4P0C7M7 580 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 PSKH1P11801 424 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 CD99P14209 185 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 FOSL1P15407 271 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 OTX1P32242 354 aaPredicted RBP10.12□□□□□ -0.79
HSPG2-206ENST00000439717 POLR2IP36954 125 aaKnown RBP10.12□□□□□ -0.79
HSPG2-206ENST00000439717 LIPAP38571 399 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 RPS27P42677 84 aaKnown RBP10.12□□□□□ -0.79
HSPG2-206ENST00000439717 ALDH3B1P43353 468 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 SLC15A1P46059 708 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 RPS7P62081 194 aaKnown RBP10.12□□□□□ -0.79
HSPG2-206ENST00000439717 APOFQ13790 326 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 NKPD1Q17RQ9 610 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 SPATA46Q5T0L3 261 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 AADACL4Q5VUY2 407 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 NXNL2Q5VZ03 156 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 CLEC2AQ6UVW9 174 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 COLCA1Q6ZS62 124 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 ZBTB49Q6ZSB9 765 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 DPY19L4Q7Z388 723 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 TCEANCQ8N8B7 351 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 BBS1Q8NFJ9 593 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 OR10S1Q8NGN2 331 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 ST7LQ8TDW4 575 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 SNX33Q8WV41 574 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 EME1Q96AY2 570 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 TEAD3Q99594 435 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 C1QTNF5Q9BXJ0 243 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 TOR3AQ9H497 397 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 CYSLTR2Q9NS75 346 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 H2AFY2Q9P0M6 372 aaPredicted RBP10.12□□□□□ -0.79
HSPG2-206ENST00000439717 STARD10Q9Y365 291 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 CELSR1Q9NYQ6 3014 aa10.12□□□□□ -0.79
HSPG2-206ENST00000439717 CCDC182A6NF36 153 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 SLC22A31A6NKX4 558 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 ZNF878C9JN71 531 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 M0R135 149 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 APOC1P02654 83 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 RAC2P15153 192 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 MPV17P39210 176 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 CDC42P60953 191 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 GRB2P62993 217 aaKnown RBP10.11□□□□□ -0.79
HSPG2-206ENST00000439717 EIF2B1Q14232 305 aaKnown RBP10.11□□□□□ -0.79
HSPG2-206ENST00000439717 GGTLC2Q14390 218 aa10.11□□□□□ -0.79
HSPG2-206ENST00000439717 MAD2L1BPQ15013 274 aaPredicted RBP10.11□□□□□ -0.79
HSPG2-206ENST00000439717 TAF13Q15543 124 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms