RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 OR10R2Q8NGX6 335 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 OR1E3Q8WZA6 343 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 FOXRED1Q96CU9 486 aaPredicted RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 NKX3-1Q99801 234 aaPredicted RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 GAL3ST1Q99999 423 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 LRRC61Q9BV99 259 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 SMCO4Q9NRQ5 59 aa7.7□□□□□ -1.18
HPS4-206ENST00000439453 DNAJB12Q9NXW2 375 aaKnown RBP7.7□□□□□ -1.18
HPS4-206ENST00000439453 TEX13DA0A0J9YY54 714 aaPredicted RBP7.69□□□□□ -1.18
HPS4-206ENST00000439453 PRR19A6NJB7 356 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 EEF1E1-BLOC1S5C9J1V9 151 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 P2RX6O15547 441 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 PIAS2O75928 621 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 FAM157CP0CG43 387 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 MUC1P15941 1255 aaPredicted RBP7.69□□□□□ -1.18
HPS4-206ENST00000439453 ABCD3P28288 659 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 CMPK1P30085 196 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 AQP2P41181 271 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 NAAAQ02083 359 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 PPP1R1AQ13522 171 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 RUNX2Q13950 521 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 RBM39Q14498 530 aaKnown RBP7.69□□□□□ -1.18
HPS4-206ENST00000439453 ISXQ2M1V0 245 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 ULK3Q6PHR2 472 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 RHOUQ7L0Q8 258 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 ABHD13Q7L211 337 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 VN1R4Q7Z5H5 301 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 SLC25A42Q86VD7 318 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 TSEN15Q8WW01 171 aaKnown RBP7.69□□□□□ -1.18
HPS4-206ENST00000439453 WASF3Q9UPY6 502 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 ARID1AO14497 2285 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 DMXL2Q8TDJ6 3036 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 A0A0B4J2A0 478 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 ELOA3DA6NLF2 546 aaPredicted RBP7.69□□□□□ -1.18
HPS4-206ENST00000439453 SDHAP31040 664 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 TOMM20Q15388 145 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 ELOA3BQ3SY89 546 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 ZNF425Q6IV72 752 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 JAZF1Q86VZ6 243 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 CDC20BQ86Y33 519 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 PRSS35Q8N3Z0 413 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 ELOA3Q8NG57 546 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 ZCCHC10Q8TBK6 192 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 MITD1Q8WV92 249 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 PMM1Q92871 262 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 EGLN1Q9GZT9 426 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 CST11Q9H112 138 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 RHOFQ9HBH0 211 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 CYTL1Q9NRR1 136 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 SHPKQ9UHJ6 478 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 KCNK6Q9Y257 313 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 SLC17A4Q9Y2C5 497 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 C9orf170A2RU37 121 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 OR52A4PA6NMU1 304 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 GATCO43716 136 aaKnown RBP7.69□□□□□ -1.18
HPS4-206ENST00000439453 IL2RAP01589 272 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 CD14P08571 375 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 TLX1P31314 330 aaPredicted RBP7.69□□□□□ -1.18
HPS4-206ENST00000439453 PPICP45877 212 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 SKP1P63208 163 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 NKPD1Q17RQ9 610 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 TMEM200AQ86VY9 491 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 C15orf54Q8N8G6 183 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 DCUN1D4Q92564 292 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 C14orf79Q96F83 325 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 PHB2Q99623 299 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 SLCO5A1Q9H2Y9 848 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 LAMP5Q9UJQ1 280 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 DTX4Q9Y2E6 619 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 CSAG2Q9Y5P2 127 aa7.69□□□□□ -1.18
HPS4-206ENST00000439453 RP1P56715 2156 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 A0A087WV62 115 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 TRBV23-1A0A0A0MS06 115 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 TVP23AA6NH52 213 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 ZNF44P15621 663 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 PSMB6P28072 239 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 KIR3DL2P43630 455 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 PPT1P50897 306 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 SLC25A1P53007 311 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 ELOCQ15369 112 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 DEFB134Q4QY38 66 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 KCTD9Q7L273 389 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 SFTPA2Q8IWL1 248 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 EXD3Q8N9H8 876 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 EDARADDQ8WWZ3 215 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 INTS12Q96CB8 462 aaKnown RBP7.68□□□□□ -1.18
HPS4-206ENST00000439453 TCEAL7Q9BRU2 100 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 HRH4Q9H3N8 390 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 SRA1Q9HD15 236 aaKnown RBP7.68□□□□□ -1.18
HPS4-206ENST00000439453 CHMP1AQ9HD42 196 aaPredicted RBP7.68□□□□□ -1.18
HPS4-206ENST00000439453 POLE3Q9NRF9 147 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 GHRLQ9UBU3 117 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 GTF2A1LQ9UNN4 478 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 CACNA1CQ13936 2221 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 LOC100509620A0A075B734 347 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 IGHV2-70P01814 119 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 CRHP06850 196 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 SFTA3P0C7M3 94 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 PAX6P26367 422 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 CCKBRP32239 447 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms