RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 MMP27Q9H306 513 aa11.92□□□□□ -0.5
LINC01088-201ENST00000437737 TOR3AQ9H497 397 aa11.92□□□□□ -0.5
LINC01088-201ENST00000437737 MEPEQ9NQ76 525 aaPredicted RBP11.92□□□□□ -0.5
LINC01088-201ENST00000437737 PURGQ9UJV8 347 aaKnown RBP11.92□□□□□ -0.5
LINC01088-201ENST00000437737 TANC2Q9HCD6 1990 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 PPIAL4EA0A075B759 164 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 PPIAL4CA0A0B4J2A2 164 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 UNC119BA6NIH7 251 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 ZNF726A6NNF4 738 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 PPIAL4DF5H284 164 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 CLDN34H7C241 214 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 KPNA4O00629 521 aaPredicted RBP11.91□□□□□ -0.5
LINC01088-201ENST00000437737 SLC16A6O15403 523 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 OR7A10O76100 309 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 SNAP29O95721 258 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 PPIAL4FP0DN26 164 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 CCL2P13500 99 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 HLA-DOBP13765 273 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 ZNF250P15622 560 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 FUT1P19526 365 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 MAKP20794 623 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 CAPGP40121 348 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 IL18R1Q13478 541 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 MOGQ16653 247 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 KLF17Q5JT82 389 aaPredicted RBP11.91□□□□□ -0.5
LINC01088-201ENST00000437737 OAFQ86UD1 273 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 C10orf53Q8N6V4 93 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 SLC30A7Q8NEW0 376 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 PFN4Q8NHR9 129 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 ZNF519Q8TB69 540 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 CYGBQ8WWM9 190 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 GTF3AQ92664 365 aaKnown RBP11.91□□□□□ -0.5
LINC01088-201ENST00000437737 TFAP2CQ92754 450 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 TAAR8Q969N4 342 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 MRI1Q9BV20 369 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 ADI1Q9BV57 179 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 PRRG3Q9BZD7 231 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 RIBC2Q9H4K1 309 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 NANSQ9NR45 359 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 MMP26Q9NRE1 261 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 FAM118AQ9NWS6 357 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 ZNF229Q9UJW7 825 aa11.91□□□□□ -0.5
LINC01088-201ENST00000437737 WNK1Q9H4A3 2382 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 IGKV1D-42A0A075B6H8 117 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 LOC100130705A0A1B0GUX0 176 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 LOC102725191A0A1B0GVB3 256 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 H3BN98 237 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 M0QZ24 198 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 DENRO43583 198 aaKnown RBP11.9□□□□□ -0.5
LINC01088-201ENST00000437737 PIP5K1CO60331 668 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 GPANK1O95872 356 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 OR8G3PP0DMU2 310 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 CRISP1P54107 249 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 SLC3A1Q07837 685 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 ZNF154Q13106 437 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 MED21Q13503 144 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 ZNF74Q16587 644 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 ZIK1Q3SY52 487 aaPredicted RBP11.9□□□□□ -0.5
LINC01088-201ENST00000437737 SLC36A3Q495N2 470 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 ZBED5Q49AG3 693 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 BRICD5Q6PL45 260 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 SKA3Q8IX90 412 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 PAQR4Q8N4S7 273 aaPredicted RBP11.9□□□□□ -0.5
LINC01088-201ENST00000437737 SETD9Q8NE22 299 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 OR52L1Q8NGH7 329 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 FGFBP3Q8TAT2 258 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 TEX47Q8TBZ9 253 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 WFDC12Q8WWY7 111 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 UBE2FQ969M7 185 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 TXNDC15Q96J42 360 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 APOL4Q9BPW4 351 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 ASPNQ9BXN1 380 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 C20orf141Q9NUB4 165 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 IL20Q9NYY1 176 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 MMP24Q9Y5R2 645 aa11.9□□□□□ -0.5
LINC01088-201ENST00000437737 MS4A18H0YCH9 400 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 DLGAP1O14490 977 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 SPRY3O43610 288 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 MITFO75030 526 aaPredicted RBP11.89□□□□□ -0.51
LINC01088-201ENST00000437737 FZD7O75084 574 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 SERPINI2O75830 405 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 ALX3O95076 343 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 CH25HO95992 272 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 GPR4P46093 362 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 MTNR1AP48039 350 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 CSNK1A1P48729 337 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 ZNF81P51508 661 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 ADARB1P78563 741 aaKnown RBP11.89□□□□□ -0.51
LINC01088-201ENST00000437737 TBC1D28Q2M2D7 210 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 MS4A18Q3C1V0 323 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 C16orf87Q6PH81 154 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 SMARCD3Q6STE5 483 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 KIR3DL3Q8N743 410 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 ADPRHL1Q8NDY3 354 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 HRASLS5Q96KN8 279 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 ANKRD60Q9BZ19 345 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 BCL2L14Q9BZR8 327 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 RNF121Q9H920 327 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 BEX1Q9HBH7 125 aa11.89□□□□□ -0.51
LINC01088-201ENST00000437737 BAIAP2Q9UQB8 552 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms