RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 KCNS3Q9BQ31 491 aa9.98□□□□□ -0.81
SNHG3-202ENST00000437681 BCL2L14Q9BZR8 327 aa9.98□□□□□ -0.81
SNHG3-202ENST00000437681 NIPAL2Q9H841 368 aa9.98□□□□□ -0.81
SNHG3-202ENST00000437681 CGGBP1Q9UFW8 167 aaPredicted RBP9.98□□□□□ -0.81
SNHG3-202ENST00000437681 CYB5R1Q9UHQ9 305 aa9.98□□□□□ -0.81
SNHG3-202ENST00000437681 COA3Q9Y2R0 106 aaPredicted RBP9.98□□□□□ -0.81
SNHG3-202ENST00000437681 ALX3O95076 343 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 SOX14O95416 240 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 CRYAAP02489 173 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 B4GALT1P15291 398 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 ZNF823P16415 610 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 PPP1R8Q12972 351 aaKnown RBP9.97□□□□□ -0.81
SNHG3-202ENST00000437681 CRMP1Q14194 572 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 RAB39AQ14964 217 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 SNAPC1Q16533 368 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 CLEC12AQ5QGZ9 265 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 AADACL4Q5VUY2 407 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 LRRC75A-AS1Q8N1F1 130 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 SDR9C7Q8NEX9 313 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 IGFBPL1Q8WX77 278 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 ASB17Q8WXJ9 295 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 C11orf40Q8WZ69 217 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 ZNF837Q96EG3 531 aaPredicted RBP9.97□□□□□ -0.81
SNHG3-202ENST00000437681 PLPPR2Q96GM1 343 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 OPA3Q9H6K4 179 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 ELOVL3Q9HB03 270 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 RPRD1BQ9NQG5 326 aaKnown RBP9.97□□□□□ -0.81
SNHG3-202ENST00000437681 BEX4Q9NWD9 120 aaPredicted RBP9.97□□□□□ -0.81
SNHG3-202ENST00000437681 NPAP1Q9NZP6 1156 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 IGKV1D-43A0A0B4J1Z2 117 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 A0A1W2PPL8 197 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 DPRXA6NFQ7 191 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 TMEM11P17152 192 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 IFITM3Q01628 133 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 MEPCEQ7L2J0 689 aaKnown RBP9.97□□□□□ -0.81
SNHG3-202ENST00000437681 DTX2Q86UW9 622 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 SNX29P2Q8IUI4 249 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 PROKR2Q8NFJ6 384 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 SLC29A1Q99808 456 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 JAM3Q9BX67 310 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 PLEKHF2Q9H8W4 249 aa9.97□□□□□ -0.81
SNHG3-202ENST00000437681 MRPS18AQ9NVS2 196 aaKnown RBP9.97□□□□□ -0.81
SNHG3-202ENST00000437681 SHISA9B4DS77 424 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 HTR1FP30939 366 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 APLNRP35414 380 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 RAD52P43351 418 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 GRB2P62993 217 aaKnown RBP9.96□□□□□ -0.81
SNHG3-202ENST00000437681 CSNK2BP67870 215 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 FMODQ06828 376 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 SLC18B1Q6NT16 456 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 SLC16A9Q7RTY1 509 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 AKAP14Q86UN6 197 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 MINDY2Q8NBR6 621 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 OR2AJ1Q8NGZ0 328 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 PTP4A1Q93096 173 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 MBOAT4Q96T53 435 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 RNF121Q9H920 327 aa9.96□□□□□ -0.81
SNHG3-202ENST00000437681 H2AFY2Q9P0M6 372 aaPredicted RBP9.96□□□□□ -0.81
SNHG3-202ENST00000437681 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.96□□□□□ -0.81
SNHG3-202ENST00000437681 SYNGR3O43761 229 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 CLPXO76031 633 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 CECR9P0C854 216 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 OPRL1P41146 370 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 CAPZA2P47755 286 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 NKX6-1P78426 367 aaPredicted RBP9.96□□□□□ -0.82
SNHG3-202ENST00000437681 BSPH1Q075Z2 132 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 UBE2UQ5VVX9 321 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 OR52N5Q8NH56 324 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 NSMAFQ92636 917 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 PIGTQ969N2 578 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 FBXO17Q96EF6 278 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 MRPL48Q96GC5 212 aaKnown RBP9.96□□□□□ -0.82
SNHG3-202ENST00000437681 INTS14Q96SY0 518 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 ZNF416Q9BWM5 594 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 INPP5EQ9NRR6 644 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 FAM118AQ9NWS6 357 aa9.96□□□□□ -0.82
SNHG3-202ENST00000437681 IGHV2OR16-5A0A0B4J2B6 119 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 LOC100130705A0A1B0GUX0 176 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 CCDC182A6NF36 153 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 CCRL2O00421 344 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 SIAH2O43255 324 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 POU1F1P28069 291 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 GLRXP35754 106 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 ELFN2Q5R3F8 820 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 PAMR1Q6UXH9 720 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 CDC20BQ86Y33 519 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 TIGD4Q8IY51 512 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 CCDC54Q8NEL0 328 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 PIK3IP1Q96FE7 263 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 POM121L2Q96KW2 1035 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 HINT3Q9NQE9 182 aaKnown RBP9.95□□□□□ -0.82
SNHG3-202ENST00000437681 EIF3KQ9UBQ5 218 aaKnown RBP9.95□□□□□ -0.82
SNHG3-202ENST00000437681 ZNF391Q9UJN7 358 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 SMG1Q96Q15 3661 aaKnown RBP9.95□□□□□ -0.82
SNHG3-202ENST00000437681 TRIM77I1YAP6 450 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 M0R1B8 84 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 SGCEO43556 437 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 CD79AP11912 226 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 ZNF32P17041 273 aa9.95□□□□□ -0.82
SNHG3-202ENST00000437681 APOBEC3AP31941 199 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms