RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TSC22D1Q15714 1073 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 PABPC1L2AQ5JQF8 200 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 FDX2Q6P4F2 183 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 OR1F12Q8NHA8 337 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 AKR7LQ8NHP1 331 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 COQ7Q99807 217 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 HDHD5Q9BXW7 423 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 SLC17A5Q9NRA2 495 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 NDUFB11Q9NX14 153 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 B3GNT2Q9NY97 397 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 ELOVL5Q9NYP7 299 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 COQ3Q9NZJ6 369 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 PNMA8CA0A1B0GUJ8 204 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 SRSF10O75494 262 aaKnown RBP20.07■□□□□ 0.8
CPSF4-204ENST00000436336 GSG1Q2KHT4 349 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF829Q3KNS6 432 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-204ENST00000436336 DMKNQ6E0U4 476 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-204ENST00000436336 STAC2Q6ZMT1 411 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 PRR7Q8TB68 274 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 RPS4Y2Q8TD47 263 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 SMIM19Q96E16 107 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 FUNDC2Q9BWH2 189 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 ATPIF1Q9UII2 106 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 R4GMQ9 66 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 KALRNO60229 2985 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 PCNX1Q96RV3 2341 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 TRBV2A0A0J9YWF9 115 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 OR6C6A6NF89 314 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 PRB1P04280 392 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 CD1AP06126 327 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 GNLYP22749 145 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 IL32P24001 234 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 CHRNB4P30926 498 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 NANOS3P60323 173 aaKnown RBP20.07■□□□□ 0.8
CPSF4-204ENST00000436336 TUBA1BP68363 451 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 ADORA2A-AS1P86434 159 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 ALKBH1Q13686 389 aaKnown RBP20.07■□□□□ 0.8
CPSF4-204ENST00000436336 IGFBP7Q16270 282 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 GPR107Q5VW38 600 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF544Q6NX49 715 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 TUBA1AQ71U36 451 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 HSD17B8Q92506 261 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 NOX3Q9HBY0 568 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 OBP2BQ9NPH6 170 aa20.07■□□□□ 0.8
CPSF4-204ENST00000436336 H3BSA7 217 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 LRRTM2O43300 516 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 COX5BP10606 129 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 CD53P19397 219 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 OTX1P32242 354 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-204ENST00000436336 MMP16P51512 607 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 PSMA6P60900 246 aaKnown RBP20.06■□□□□ 0.8
CPSF4-204ENST00000436336 MTFR2Q6P444 385 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 ARL9Q6T311 187 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 CLVS1Q8IUQ0 354 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF843Q8N446 348 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 OR2G2Q8NGZ5 317 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 ASB5Q8WWX0 329 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 SPTSSAQ969W0 71 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 CCDC120Q96HB5 630 aa20.06■□□□□ 0.8
CPSF4-204ENST00000436336 TMEM269A0A1B0GVZ9 245 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 PNPP00491 289 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 APOC1P02654 83 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 CRYGSP22914 178 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 HTR5AP47898 357 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 UQCRFS1P47985 274 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 CCR9P51686 369 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 PRKXP51817 358 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 GALK2Q01415 458 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 PLP2Q04941 152 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 SOWAHCQ53LP3 525 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-204ENST00000436336 P2RY8Q86VZ1 359 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 ANKRD13BQ86YJ7 626 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 RBM38Q9H0Z9 239 aaKnown RBP20.05■□□□□ 0.8
CPSF4-204ENST00000436336 FRRS1LQ9P0K9 344 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 SF3B6Q9Y3B4 125 aaKnown RBP20.05■□□□□ 0.8
CPSF4-204ENST00000436336 CEPT1Q9Y6K0 416 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 OR5H1A6NKK0 313 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 LOC110117498-PIK3R3F6TDL0 507 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 GABRA5P31644 462 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 GDI2P50395 445 aaKnown RBP20.05■□□□□ 0.8
CPSF4-204ENST00000436336 SLC3A1Q07837 685 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 MFGE8Q08431 387 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-204ENST00000436336 RSPO1Q2MKA7 263 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-204ENST00000436336 SLC25A35Q3KQZ1 300 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 C4orf17Q53FE4 359 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 MDP1Q86V88 176 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 CATSPERDQ86XM0 798 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF283Q8N7M2 679 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 WDR31Q8NA23 367 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 CPEB3Q8NE35 698 aaKnown RBP20.05■□□□□ 0.8
CPSF4-204ENST00000436336 PGLYRP3Q96LB9 341 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 C4orf45Q96LM5 186 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 MOB1AQ9H8S9 216 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 FAM206AQ9NX38 181 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 AMDHD2Q9Y303 409 aa20.05■□□□□ 0.8
CPSF4-204ENST00000436336 F5H5K5 113 aa20.04■□□□□ 0.8
CPSF4-204ENST00000436336 PSMA1P25786 263 aaKnown RBP20.04■□□□□ 0.8
CPSF4-204ENST00000436336 CX3CR1P49238 355 aa20.04■□□□□ 0.8
CPSF4-204ENST00000436336 KRTAP27-1Q3LI81 207 aa20.04■□□□□ 0.8
CPSF4-204ENST00000436336 WDR38Q5JTN6 314 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms