RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NPTNQ9Y639 398 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 PRSS21Q9Y6M0 314 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 PAPLNO95428 1278 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 TXNDC12O95881 172 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 RAB5AP20339 215 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 FOXK2Q01167 660 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 DHODHQ02127 395 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 DOC2BQ14184 412 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF691Q5VV52 312 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 LYPD4Q6UWN0 246 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 SRMP19623 302 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 COX5AP20674 150 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 NUP37Q8NFH4 326 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 ZFAND2BQ8WV99 257 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 PDLIM7Q9NR12 457 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 NEURL4Q96JN8 1562 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 HOXC11O43248 304 aaPredicted RBP10.21□□□□□ -0.77
SCN4A-201ENST00000435607 CD22P20273 847 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 LIM2P55344 173 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.77
SCN4A-201ENST00000435607 C18orf63Q68DL7 685 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF620Q6ZNG0 422 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 NCCRP1Q6ZVX7 275 aaPredicted RBP10.21□□□□□ -0.77
SCN4A-201ENST00000435607 TVP23CQ96ET8 276 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 PELI1Q96FA3 418 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 TAF9BQ9HBM6 251 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF586Q9NXT0 402 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 EBF1Q9UH73 591 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 DNAJC25-GNG10A0A024R161 153 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM267Q0VDI3 215 aaPredicted RBP10.21□□□□□ -0.77
SCN4A-201ENST00000435607 SPNS3Q6ZMD2 512 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 OR1L1Q8NH94 360 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 GABARAPL1Q9H0R8 117 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 NARFLQ9H6Q4 476 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 CACNA1CQ13936 2221 aa10.21□□□□□ -0.77
SCN4A-201ENST00000435607 HRO43593 1189 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 FURINP09958 794 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 T-ENOLP0DO92 83 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 FPR3P25089 353 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 PLK5Q496M5 336 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 PLA1AQ53H76 456 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 FA2HQ7L5A8 372 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 GPR32P1Q8NGA4 272 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 OR52N5Q8NH56 324 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 TSLPQ969D9 159 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 SLCO4A1Q96BD0 722 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 DDOQ99489 341 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 FLVCR1Q9Y5Y0 555 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 FMN2Q9NZ56 1722 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 IGHV3-20A0A0C4DH32 117 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 SULT1C4O75897 302 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 SLC25A6P12236 298 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 GDNFP39905 211 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 OXA1LQ15070 435 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 FCRL6Q6DN72 434 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 DTWD2Q8NBA8 298 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 CRISPLD2Q9H0B8 497 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 DUSP22Q9NRW4 184 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 SNNO75324 88 aaPredicted RBP10.21□□□□□ -0.78
SCN4A-201ENST00000435607 AGFG2O95081 481 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 RBPMS2Q6ZRY4 209 aaKnown RBP10.21□□□□□ -0.78
SCN4A-201ENST00000435607 HSD17B11Q8NBQ5 300 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 OR2Z1Q8NG97 314 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 OR1J1Q8NGS3 322 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 DPH3Q96FX2 82 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 SEC22AQ96IW7 307 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 ASB16Q96NS5 453 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 LAT2Q9GZY6 243 aa10.21□□□□□ -0.78
SCN4A-201ENST00000435607 TAAR5O14804 337 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 NTF3P20783 257 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 TBCEQ15813 527 aaPredicted RBP10.2□□□□□ -0.78
SCN4A-201ENST00000435607 TMEM97Q5BJF2 176 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 SLC15A4Q8N697 577 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 NEIL1Q96FI4 390 aaPredicted RBP10.2□□□□□ -0.78
SCN4A-201ENST00000435607 ANKRD60Q9BZ19 345 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 OR5V1Q9UGF6 321 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 OSGIN1Q9UJX0 560 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 EVPLQ92817 2033 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 PDGFBP01127 241 aaPredicted RBP10.2□□□□□ -0.78
SCN4A-201ENST00000435607 METRNLQ641Q3 311 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 TRAT1Q6PIZ9 186 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF788Q6ZQV5 615 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 OR2A1Q8NGT9 310 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 PRR7Q8TB68 274 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 GLIPR2Q9H4G4 154 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 C1RLQ9NZP8 487 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 SLAMF8Q9P0V8 285 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.2□□□□□ -0.78
SCN4A-201ENST00000435607 M0R082 166 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 SOD1P00441 154 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 DSCR4P56555 118 aaPredicted RBP10.2□□□□□ -0.78
SCN4A-201ENST00000435607 FZD2Q14332 565 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 POU4F3Q15319 338 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 SLC29A1Q99808 456 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 C20orf24Q9BUV8 137 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 PPIL1Q9Y3C6 166 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 TRBV4-1A0A0J9YWV2 114 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 A0A1W2PN81 502 aa10.2□□□□□ -0.78
SCN4A-201ENST00000435607 G3V2L1 256 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms