RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 LINC01590Q5TEZ4 76 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 RFPL4BQ6ZWI9 263 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 BCDIN3DQ7Z5W3 292 aaKnown RBP13.36□□□□□ -0.27
TREX1-201ENST00000433541 GID4Q8IVV7 300 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 ZNF555Q8NEP9 628 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 THEM6Q8WUY1 208 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 SLAMF6Q96DU3 332 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 MAP6Q96JE9 813 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 SLC29A1Q99808 456 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 GSX2Q9BZM3 304 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 DCLRE1BQ9H816 532 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 N6AMT1Q9Y5N5 214 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 SLC22A31A6NKX4 558 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 ZNF878C9JN71 531 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 M0R233 179 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 NGFP01138 241 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 MT-ND5P03915 603 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 ATP6V1E1P36543 226 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 SLC15A1P46059 708 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 RGS6P49758 472 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 NUDT6P53370 316 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 TPTEP56180 551 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 HIST1H3AP68431 136 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 EFNB3Q15768 340 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 HIST2H3PS2Q5TEC6 136 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 NXNL2Q5VZ03 156 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 C11orf71Q6IPW1 123 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 HIST2H3AQ71DI3 136 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.35□□□□□ -0.27
TREX1-201ENST00000433541 C1orf174Q8IYL3 243 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 LRRC75A-AS1Q8N1F1 130 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 OR8J1Q8NGP2 316 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 SLC25A40Q8TBP6 338 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 COG8Q96MW5 612 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 DCLRE1CQ96SD1 692 aaKnown RBP13.35□□□□□ -0.27
TREX1-201ENST00000433541 CNN2Q99439 309 aaKnown RBP13.35□□□□□ -0.27
TREX1-201ENST00000433541 OR2J1Q9GZK6 312 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 VCXQ9H320 206 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 BARX1Q9HBU1 254 aaPredicted RBP13.35□□□□□ -0.27
TREX1-201ENST00000433541 LAMP5Q9UJQ1 280 aa13.35□□□□□ -0.27
TREX1-201ENST00000433541 FBXO9Q9UK97 447 aaPredicted RBP13.35□□□□□ -0.27
TREX1-201ENST00000433541 PRRC2AP48634 2157 aaKnown RBP13.35□□□□□ -0.27
TREX1-201ENST00000433541 MAP1AP78559 2803 aaPredicted RBP13.35□□□□□ -0.27
TREX1-201ENST00000433541 PLSCR5A0PG75 271 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 OVOL3O00110 214 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 CLPTM1O96005 669 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 LCATP04180 440 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 LYNP07948 512 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 H2BFMP0C1H6 154 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 PSKH1P11801 424 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 SLC2A5P22732 501 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 PEX2P28328 305 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 ALDH3B1P43353 468 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 PRKXP51817 358 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 MAD2L1BPQ15013 274 aaPredicted RBP13.34□□□□□ -0.27
TREX1-201ENST00000433541 MOGQ16653 247 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 SWI5Q1ZZU3 235 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 TEX30Q5JUR7 227 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 MEPCEQ7L2J0 689 aaKnown RBP13.34□□□□□ -0.27
TREX1-201ENST00000433541 LRP11Q86VZ4 500 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 ZNF283Q8N7M2 679 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 CYGBQ8WWM9 190 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 APOBEC3DQ96AK3 386 aaPredicted RBP13.34□□□□□ -0.27
TREX1-201ENST00000433541 MBOAT4Q96T53 435 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 TEAD3Q99594 435 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 RAB1BQ9H0U4 201 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 TPK1Q9H3S4 243 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 SMPD3Q9NY59 655 aaPredicted RBP13.34□□□□□ -0.27
TREX1-201ENST00000433541 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 DNAJC27Q9NZQ0 273 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 TAAR3PQ9P1P4 343 aa13.34□□□□□ -0.27
TREX1-201ENST00000433541 H7C417 338 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 M0R135 149 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 TPD52L2O43399 206 aaKnown RBP13.33□□□□□ -0.28
TREX1-201ENST00000433541 TIMM8AO60220 97 aaPredicted RBP13.33□□□□□ -0.28
TREX1-201ENST00000433541 SSX4O60224 188 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 NDUFS7O75251 213 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 ADRA2AP08913 450 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 PPOXP50336 477 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 GRB2P62993 217 aaKnown RBP13.33□□□□□ -0.28
TREX1-201ENST00000433541 MALLQ13021 153 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 CARTPTQ16568 116 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 MST1LQ2TV78 715 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 SHEQ5VZ18 495 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 SLC16A9Q7RTY1 509 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 KRT77Q7Z794 578 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 TIGD4Q8IY51 512 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 ZNF454Q8N9F8 522 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 KLF14Q8TD94 323 aaPredicted RBP13.33□□□□□ -0.28
TREX1-201ENST00000433541 IPCEF1Q8WWN9 437 aaPredicted RBP13.33□□□□□ -0.28
TREX1-201ENST00000433541 IGFBPL1Q8WX77 278 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 RFKQ969G6 155 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 ZNF799Q96GE5 643 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 HRASLS5Q96KN8 279 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 ABHD6Q9BV23 337 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 TTTY10Q9BZA0 68 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 MARCH7Q9H992 704 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 C8orf4Q9NR00 106 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 ZNF701Q9NV72 531 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms