RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 BCHEP06276 602 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 WNT2P09544 360 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 PGA3P0DJD8 388 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 SNHG28P0DPA3 235 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ESDP10768 282 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 HOXA5P20719 270 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ADORA2BP29275 332 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 FGF9P31371 208 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 BDKRB1P46663 353 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 BTG2P78543 158 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 EBPQ15125 230 aaKnown RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OR1Q1Q15612 314 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 SNRNP35Q16560 246 aaKnown RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 MESTQ5EB52 335 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM225Q6GV28 225 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 DLEU7Q6UYE1 221 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 FA2HQ7L5A8 372 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 TEX26Q8N6G2 289 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 DNAJC5GQ8N7S2 189 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 PNLDC1Q8NA58 520 aaKnown RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ABHD4Q8TB40 342 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 BLNKQ8WV28 456 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GMPPAQ96IJ6 420 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 DUSP15Q9H1R2 295 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 DCAF13Q9NV06 445 aaKnown RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM38BQ9NVV0 291 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 CBLCQ9ULV8 474 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 RNF6Q9Y252 685 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 LAMTOR2Q9Y2Q5 125 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 B3GALT1Q9Y5Z6 326 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 KIR2DS1A0A191URI9 304 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 A0A1B0GU03 582 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 PSMB11A5LHX3 300 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OTOL1A6NHN0 477 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ISM1B1AKI9 464 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GLUD1P00367 558 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 CTSDP07339 412 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 NGFRP08138 427 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 SOD3P08294 240 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 NMBP08949 121 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GKN3PP0CG01 181 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 CDK2P24941 298 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 CCKARP32238 428 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OR3A4PP47883 348 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 CRMP1Q14194 572 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 KIR2DS1Q14954 304 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 NKPD1Q17RQ9 610 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 TCEAL5Q5H9L2 206 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 LAMTOR1Q6IAA8 161 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 RGMBQ6NW40 437 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 SPRED2Q7Z698 418 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OR4S1Q8NGB4 309 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OR52E4Q8NGH9 312 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OR5AR1Q8NGP9 310 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OR1P1Q8NH06 330 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 KCTD7Q96MP8 289 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 PCDHB18PQ96TA0 734 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ATP5SQ99766 215 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 RSG1Q9BU20 258 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 VAMP8Q9BV40 100 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 HES7Q9BYE0 225 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 C11orf54Q9H0W9 315 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 SYT4Q9H2B2 425 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 RNF167Q9H6Y7 350 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 TXNL4BQ9NX01 149 aaKnown RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 PLA2G3Q9NZ20 509 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 PLEKHB1Q9UF11 243 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 AUP1Q9Y679 476 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ASXL1Q8IXJ9 1541 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 DOCK3Q8IZD9 2030 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GOLGA4Q13439 2230 aaKnown RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 SPAARA0A1B0GVQ0 90 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GAGE10A6NGK3 116 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 B4DXG7 233 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ISG15P05161 165 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 HOXC6P09630 235 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 AOC1P19801 751 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 HIST1H1TP22492 207 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 KDM5CP41229 1560 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 MESP2Q0VG99 397 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 SPIN4Q56A73 249 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 C9orf135Q5VTT2 229 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 NKAIN2Q5VXU1 208 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 WDR82Q6UXN9 313 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF571Q7Z3V5 609 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GRASPQ7Z6J2 395 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 OR2T4Q8NH00 348 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 SNIP1Q8TAD8 396 aaKnown RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM171Q8WVE6 324 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GALMQ96C23 342 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 RNF183Q96D59 192 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ZBTB45Q96K62 511 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-203ENST00000430976 TEX37Q96LM6 180 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GPR137Q96N19 417 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ABHD14AQ9BUJ0 271 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 ADGRL4Q9HBW9 690 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 LGALS13Q9UHV8 139 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 FBXO4Q9UKT5 387 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 B3GALT5Q9Y2C3 310 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms