RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 SEMG1P04279 462 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 SRFP11831 508 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 SELENBP1Q13228 472 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 DUSP22Q9NRW4 184 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 FLVCR1Q9Y5Y0 555 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 THEM4Q5T1C6 240 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 FAM122CQ6P4D5 195 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 C1orf87Q8N0U7 546 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 FBXO17Q96EF6 278 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 PTDSS2Q9BVG9 487 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 SDK1Q7Z5N4 2213 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 CHEK1O14757 476 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 KLK10O43240 276 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 ZGLP1P0C6A0 271 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 OR5H6Q8NGV6 325 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 OR4Q3Q8NH05 313 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 APH1BQ8WW43 257 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 CORO2AQ92828 525 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 SEH1LQ96EE3 360 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 CLCF1Q9UBD9 225 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 KLK4Q9Y5K2 254 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 ZNF195O14628 629 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 METTL15P1P0C7V9 234 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 B4GALT1P15291 398 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 TMEM102Q8N9M5 508 aaPredicted RBP14.01□□□□□ -0.17
PTPRF-206ENST00000429895 MORN4Q8NDC4 146 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 TMEM230Q96A57 120 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 ATF6BQ99941 703 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 FAM103A1Q9BTL3 118 aaKnown RBP14.01□□□□□ -0.17
PTPRF-206ENST00000429895 GON7Q9BXV9 100 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 LAT2Q9GZY6 243 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 NID1P14543 1247 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 SDHAP31040 664 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 LIPAP38571 399 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 KCNRGQ8N5I3 272 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 OR5B3Q8NH48 314 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 KCNE4Q8WWG9 221 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 ONECUT1Q9UBC0 465 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 CHD4Q14839 1912 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 NCBP2LA6PVI3 153 aaKnown RBP14.01□□□□□ -0.17
PTPRF-206ENST00000429895 SPI1P17947 270 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 RPL18Q07020 188 aaKnown RBP14.01□□□□□ -0.17
PTPRF-206ENST00000429895 TMUB2Q71RG4 321 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 SOX7Q9BT81 388 aa14.01□□□□□ -0.17
PTPRF-206ENST00000429895 SPRY3O43610 288 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 TMPRSS11DO60235 418 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 HAAOP46952 286 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 WDR88Q6ZMY6 472 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 GPR119Q8TDV5 335 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 AK3Q9UIJ7 227 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 CSAG2Q9Y5P2 127 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 TSEN54Q7Z6J9 526 aaKnown RBP14□□□□□ -0.17
PTPRF-206ENST00000429895 ZNF573Q86YE8 665 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 GABRG1Q8N1C3 465 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 C16orf52Q8NHV5 167 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 S1PR3Q99500 378 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 DHRS9Q9BPW9 319 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 OR2W5A6NFC9 320 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 ZNF724A8MTY0 619 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 VAMP5O95183 116 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 FKBP2P26885 142 aaKnown RBP14□□□□□ -0.17
PTPRF-206ENST00000429895 DBPQ10586 325 aaPredicted RBP14□□□□□ -0.17
PTPRF-206ENST00000429895 HAGHQ16775 308 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 OR2AK2Q8NG84 335 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 IP6K3Q96PC2 410 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 CHRM2P08172 466 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 DTYMKP23919 212 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 S100A11P31949 105 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 CAPZBP47756 277 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 OR13C5Q8NGS8 318 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 OXGR1Q96P68 337 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 CHST6Q9GZX3 395 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 ZNF85Q03923 595 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 FCRL6Q6DN72 434 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 RNF167Q9H6Y7 350 aa14□□□□□ -0.17
PTPRF-206ENST00000429895 ERHP84090 104 aaKnown RBP13.99□□□□□ -0.17
PTPRF-206ENST00000429895 LCN15Q6UWW0 184 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 ZDHHC23Q8IYP9 409 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 ZFP62Q8NB50 900 aaPredicted RBP13.99□□□□□ -0.17
PTPRF-206ENST00000429895 SLC38A9Q8NBW4 561 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 COMMD5Q9GZQ3 224 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 PLA2G3Q9NZ20 509 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 CLEC1BQ9P126 229 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 CRYBA1P05813 215 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 SBK2P0C263 348 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 OR5I1Q13606 314 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 SYT14P1Q58G82 188 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 PDZD11Q5EBL8 140 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 NLRC3Q7RTR2 1065 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 TMEM123Q8N131 208 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 OR4F5Q8NH21 305 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 OR4F4Q96R69 305 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 ZPBPQ9BS86 351 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 NUDT9Q9BW91 350 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 OR2J3O76001 311 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 IGFBP6P24592 240 aaPredicted RBP13.99□□□□□ -0.17
PTPRF-206ENST00000429895 TOR2AQ5JU69 321 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 MOB3BQ86TA1 216 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 OR13C8Q8NGS7 320 aa13.99□□□□□ -0.17
PTPRF-206ENST00000429895 M0QZ24 198 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms