RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 CXorf67Q86X51 503 aaPredicted RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 GLB1L2Q8IW92 636 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR51A4Q8NGJ6 313 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 POM121Q96HA1 1249 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 FOXB1Q99853 325 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 CCDC32Q9BV29 185 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 SF3B5Q9BWJ5 86 aaKnown RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 PRRG3Q9BZD7 231 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 MRM2Q9UI43 246 aaKnown RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 LAMP5Q9UJQ1 280 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC22A13Q9Y226 551 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 FIGNL2A6NMB9 653 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 LMX1BO60663 402 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 CD79AP11912 226 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 TGM4P49221 684 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 TPTEP56180 551 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC25A30Q5SVS4 291 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 THEM4Q5T1C6 240 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 GDPD3Q7L5L3 318 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 SYT9Q86SS6 491 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 GID4Q8IVV7 300 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 ACBD7Q8N6N7 88 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 NANOGP1Q8N7R0 232 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 RFKQ969G6 155 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF319Q9P2F9 582 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 CRNNQ9UBG3 495 aaPredicted RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 FKBP7Q9Y680 259 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 LOC102725191A0A1B0GVB3 256 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR14I1A6ND48 311 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 A6NIZ1 184 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 FAM90A27PA6NNH2 459 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 AHRRA9YTQ3 701 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 F5H5K5 113 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 IL2RAP01589 272 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF32P17041 273 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 CELP19835 753 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 ALOX5APP20292 161 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 CRYBB2P43320 205 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC25A1P53007 311 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 RAP1BP61224 184 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 RAP1AP62834 184 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC3A1Q07837 685 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 RAB40BQ12829 278 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 RNPS1Q15287 305 aaKnown RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 GUSBP1Q15486 140 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 KCNJ8Q15842 424 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 RSPO1Q2MKA7 263 aaPredicted RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 SPANXN2Q5MJ10 180 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF322Q6U7Q0 402 aaPredicted RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC43A2Q8N370 569 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 PAQR4Q8N4S7 273 aaPredicted RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 RELL2Q8NC24 303 aaPredicted RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 CPEB3Q8NE35 698 aaKnown RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 ST7LQ8TDW4 575 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 SNX33Q8WV41 574 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 PELI1Q96FA3 418 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 GMPPAQ96IJ6 420 aaPredicted RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 TMED9Q9BVK6 235 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 MND1Q9BWT6 205 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 PPP1R3EQ9H7J1 279 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 SMURF1Q9HCE7 757 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 NDUFB11Q9NX14 153 aa8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 CAB39Q9Y376 341 aaPredicted RBP8.33□□□□□ -1.08
HMGCLL1-206ENST00000428842 HTR3EA5X5Y0 456 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 MBD3L4A6NDZ8 208 aaPredicted RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 MBD3L3A6NE82 208 aaPredicted RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 MBD3L5A6NJ08 208 aaPredicted RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 CTDSP2O14595 271 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZG16O60844 167 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 SS18L1O75177 396 aaPredicted RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 KHDRBS3O75525 346 aaKnown RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 CGAP01215 116 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 APEX1P27695 318 aaKnown RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 RPS19P39019 145 aaKnown RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 MLLT11Q13015 90 aaPredicted RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 SPHARQ15513 63 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 CCBE1Q6UXH8 406 aaPredicted RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 AKAP14Q86UN6 197 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 CDC20BQ86Y33 519 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC22A24Q8N4F4 322 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 POMGNT2Q8NAT1 580 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 OTOSQ8NHW6 89 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 MBD3L2Q8NHZ7 208 aaPredicted RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 WNT2BQ93097 391 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC30A2Q9BRI3 323 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 BARHL1Q9BZE3 327 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 PPIL3Q9H2H8 161 aaKnown RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 ELOVL3Q9HB03 270 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 TMEM38BQ9NVV0 291 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 CYB5R1Q9UHQ9 305 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 GDF2Q9UK05 429 aaPredicted RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 STUB1Q9UNE7 303 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 DIMT1Q9UNQ2 313 aaKnown RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 EXOGQ9Y2C4 368 aaKnown RBP8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 APCP25054 2843 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF670-ZNF695F2Z2N8 137 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 C3orf80F5H4A9 247 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 MYL12BO14950 172 aa8.32□□□□□ -1.08
HMGCLL1-206ENST00000428842 DNPH1O43598 174 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms