RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FGF20Q9NP95 211 aaPredicted RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 SIGLEC7Q9Y286 467 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 PAHP00439 452 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 CYC1P08574 325 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 CLVS2Q5SYC1 327 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 B3GNTL1Q67FW5 361 aaPredicted RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 TMEM185AQ8NFB2 350 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 DNASE2BQ8WZ79 361 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 DUSP21Q9H596 190 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 NDUFB11Q9NX14 153 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 MYO16Q9Y6X6 1858 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 A0A1W2PQD3 144 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 SLC9A3R2Q15599 337 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 RGS7BPQ6MZT1 257 aaPredicted RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 SCCPDHQ8NBX0 429 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 OR56B4Q8NH76 319 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 OR10D3Q8NH80 312 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 UPRTQ96BW1 309 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 ZNF71Q9NQZ8 489 aaPredicted RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 NECAP2Q9NVZ3 263 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 WNT1P04628 370 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 HOXB5P09067 269 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 MFGE8Q08431 387 aaPredicted RBP12.5□□□□□ -0.41
RPL28-202ENST00000426763 CDK5R1Q15078 307 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 GPR157Q5UAW9 335 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 LSRQ86X29 649 aaPredicted RBP12.5□□□□□ -0.41
RPL28-202ENST00000426763 SGK3Q96BR1 496 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 KIRREL1Q96J84 757 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 VSTM2LQ96N03 204 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 BANF2Q9H503 90 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 KIR2DS1A0A191URI9 304 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 NPIPB8E9PQR5 432 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 ARPC5O15511 151 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 PDGFBP01127 241 aaPredicted RBP12.5□□□□□ -0.41
RPL28-202ENST00000426763 KIR2DS4P43632 304 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 SRPXP78539 464 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 KIR2DS1Q14954 304 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 TSC22D1Q15714 1073 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 SPINK14Q6IE38 97 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 STEAP1BQ6NZ63 245 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 PLXDC2Q6UX71 529 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 COMTD1Q86VU5 262 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 ZDHHC23Q8IYP9 409 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 ZNF285Q96NJ3 590 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 SLC25A31Q9H0C2 315 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 SLCO1C1Q9NYB5 712 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 H7C2Y5 167 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 SH2D1BO14796 132 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 TUSC2O75896 110 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 HTR2AP28223 471 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 GSG1Q2KHT4 349 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 APOBEC3DQ96AK3 386 aaPredicted RBP12.5□□□□□ -0.41
RPL28-202ENST00000426763 ZG16BQ96DA0 208 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 C10orf90Q96M02 699 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 TMEM246Q9BRR3 403 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 JAM3Q9BX67 310 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 PLA2G12AQ9BZM1 189 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 EIF5A2Q9GZV4 153 aaKnown RBP12.5□□□□□ -0.41
RPL28-202ENST00000426763 PRELID3BQ9Y3B1 194 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 TCRBV16S1A1N1A0A5B0 115 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 BHLHE40O14503 412 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 PSMB1P20618 241 aaKnown RBP12.5□□□□□ -0.41
RPL28-202ENST00000426763 CDAP32320 146 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 ECI1P42126 302 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 SLC25A1P53007 311 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 KCNJ8Q15842 424 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 AKR7LQ8NHP1 331 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 OR2M2Q96R28 347 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 UBL7Q96S82 380 aaPredicted RBP12.5□□□□□ -0.41
RPL28-202ENST00000426763 SULT4A1Q9BR01 284 aa12.5□□□□□ -0.41
RPL28-202ENST00000426763 TRABD2BA6NFA1 517 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 TRIM64BA6NI03 449 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 FABP6P51161 128 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
RPL28-202ENST00000426763 FUT7Q11130 342 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 GTPBP8Q8N3Z3 284 aaPredicted RBP12.49□□□□□ -0.41
RPL28-202ENST00000426763 HS3ST1O14792 307 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 GSTP1P09211 210 aaKnown RBP12.49□□□□□ -0.41
RPL28-202ENST00000426763 GLRA1P23415 457 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 AKR1D1P51857 326 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 ZNF92Q03936 586 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 ESCO2Q56NI9 601 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 PBDC1Q9BVG4 233 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 C1orf123Q9NWV4 160 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 A3GALT2U3KPV4 340 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 FTH1P19P0C7X4 201 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 MRGPREQ86SM8 312 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 SFTPA2Q8IWL1 248 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 DNAJC5GQ8N7S2 189 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 ZNF321PQ8N8H1 164 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 ZNF501Q96CX3 271 aaPredicted RBP12.49□□□□□ -0.41
RPL28-202ENST00000426763 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
RPL28-202ENST00000426763 MAGEB4O15481 346 aaPredicted RBP12.49□□□□□ -0.41
RPL28-202ENST00000426763 NFYBP25208 207 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 RPS19P39019 145 aaKnown RBP12.49□□□□□ -0.41
RPL28-202ENST00000426763 UCNP55089 124 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 RAB1AP62820 205 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 PCK2Q16822 640 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 C12orf73Q69YU5 71 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 OR1F12Q8NHA8 337 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms