RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ARRDC5A6NEK1 342 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 FAM183AA6NL82 134 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 NDUFS8O00217 210 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 CD5LO43866 347 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 IGHV4-31P0DP07 118 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 USF1P22415 310 aaPredicted RBP11.62□□□□□ -0.55
SNX3-204ENST00000426155 POU1F1P28069 291 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 IL2RGP31785 369 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 GGT2P36268 569 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 RBMXP38159 391 aaKnown RBP11.62□□□□□ -0.55
SNX3-204ENST00000426155 MMP15P51511 669 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 SELENOVP59797 346 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 COX10Q12887 443 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 CCNIQ14094 377 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 TSTQ16762 297 aaKnown RBP11.62□□□□□ -0.55
SNX3-204ENST00000426155 ZNF718Q3SXZ3 478 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 MBNL2Q5VZF2 373 aaKnown RBP11.62□□□□□ -0.55
SNX3-204ENST00000426155 CD300LDQ6UXZ3 194 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 ZNF786Q8N393 782 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 TEX47Q8TBZ9 253 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 SNX33Q8WV41 574 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 SOX7Q9BT81 388 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 WACQ9BTA9 647 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 WDR76Q9H967 626 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 NTN4Q9HB63 628 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 BATF3Q9NR55 127 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 SLCO1C1Q9NYB5 712 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 COMMD3-BMI1R4GMX3 469 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 SPRY3O43610 288 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 CDC14BO60729 498 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 IGHV1-46P01743 117 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 SPI1P17947 270 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 ANOS1P23352 680 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 GIFP27352 417 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 ARHGDIAP52565 204 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 PSG7Q13046 419 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 RIN1Q13671 783 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 GK3PQ14409 553 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 RSPO1Q2MKA7 263 aaPredicted RBP11.61□□□□□ -0.55
SNX3-204ENST00000426155 SPRNQ5BIV9 151 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 C6orf52Q5T4I8 152 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 ZNF511Q8NB15 262 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 GJC3Q8NFK1 279 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 OR10S1Q8NGN2 331 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 OR2T4Q8NH00 348 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 MAP6Q96JE9 813 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 NMNAT2Q9BZQ4 307 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 HDHD2Q9H0R4 259 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 NARFLQ9H6Q4 476 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 ELOVL3Q9HB03 270 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 MSL2Q9HCI7 577 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 PNRC2Q9NPJ4 139 aaKnown RBP11.61□□□□□ -0.55
SNX3-204ENST00000426155 YAE1D1Q9NRH1 226 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 CMC2Q9NRP2 79 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 PTTG3PQ9NZH4 202 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 DNAJB9Q9UBS3 223 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 CYB5R1Q9UHQ9 305 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 BAIAP2Q9UQB8 552 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 CACNG2Q9Y698 323 aa11.61□□□□□ -0.55
SNX3-204ENST00000426155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.61□□□□□ -0.553e-11■■■■■ 37.2
SNX3-204ENST00000426155 LILRA1O75019 489 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 RP2O75695 350 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 ATP5HO75947 161 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 CALRP27797 417 aaKnown RBP11.6□□□□□ -0.55
SNX3-204ENST00000426155 RASSF2P50749 326 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 ZNF81P51508 661 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 PPP2R2BQ00005 443 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 GINS1Q14691 196 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 HLXQ14774 488 aaPredicted RBP11.6□□□□□ -0.55
SNX3-204ENST00000426155 C1orf146Q5VVC0 180 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 ACSM5Q6NUN0 579 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 ARL9Q6T311 187 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 NAA40Q86UY6 237 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 OR6K6Q8NGW6 343 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 UTP4Q969X6 686 aaKnown RBP11.6□□□□□ -0.55
SNX3-204ENST00000426155 OTULINQ96BN8 352 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 PITX2Q99697 317 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 COQ7Q99807 217 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 CDADC1Q9BWV3 514 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 ZNF275Q9NSD4 429 aaPredicted RBP11.6□□□□□ -0.55
SNX3-204ENST00000426155 TBCCD1Q9NVR7 557 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 TREM2Q9NZC2 230 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 ATPIF1Q9UII2 106 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 GPR160Q9UJ42 338 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 KLHL21Q9UJP4 597 aa11.6□□□□□ -0.55
SNX3-204ENST00000426155 RIIAD1A6NNX1 92 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 F5H5K5 113 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 WNT9BO14905 357 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 TIMM8AO60220 97 aaPredicted RBP11.59□□□□□ -0.55
SNX3-204ENST00000426155 SPARCP09486 303 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 OSMP13725 252 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 ZNF823P16415 610 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 ZNF23P17027 643 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 GRK5P34947 590 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 SLC25A1P53007 311 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 LINC01590Q5TEZ4 76 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 TMEM236Q5W0B7 351 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 SHQ1Q6PI26 577 aaKnown RBP11.59□□□□□ -0.55
SNX3-204ENST00000426155 UNQ6126/PRO20091Q6UXV3 157 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 Q6ZR03 302 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms