RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 FAM189A2Q15884 450 aa11.21□□□□□ -0.61
VEGFB-202ENST00000426086 ARL9Q6T311 187 aa11.21□□□□□ -0.61
VEGFB-202ENST00000426086 OR8G5Q8NG78 346 aa11.21□□□□□ -0.61
VEGFB-202ENST00000426086 PTP4A1Q93096 173 aa11.21□□□□□ -0.61
VEGFB-202ENST00000426086 SIRPDQ9H106 197 aa11.21□□□□□ -0.61
VEGFB-202ENST00000426086 STX18Q9P2W9 335 aaKnown RBP11.21□□□□□ -0.61
VEGFB-202ENST00000426086 TMCC3Q9ULS5 477 aa11.21□□□□□ -0.61
VEGFB-202ENST00000426086 IGHV1-69DA0A0B4J2H0 117 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 C12orf71A8MTZ7 269 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 ZNF879B4DU55 563 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 P2RY10O00398 339 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 PHYHO14832 338 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 SGCEO43556 437 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 ENSAO43768 121 aaKnown RBP11.2□□□□□ -0.62
VEGFB-202ENST00000426086 TOX4O94842 621 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 FSTL3O95633 263 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 IGHV1-69P01742 117 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 CSF1P09603 554 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 RAC2P15153 192 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 CTXN1P60606 82 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 MAB21L1Q13394 359 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 PIN1Q13526 163 aaPredicted RBP11.2□□□□□ -0.62
VEGFB-202ENST00000426086 ZNF181Q2M3W8 571 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 ALG10Q5BKT4 473 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 DCDC5Q6ZRR9 648 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 NLRC3Q7RTR2 1065 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 SYT9Q86SS6 491 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 PDZD9Q8IXQ8 264 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 MICU2Q8IYU8 434 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 BHLHE23Q8NDY6 225 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 TBC1D15Q8TC07 691 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 TMEM239Q8WW34 195 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 LHX4Q969G2 390 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 WDFY2Q96P53 400 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 RBP7Q96R05 134 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 SEMA6AQ9H2E6 1030 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 RASSF4Q9H2L5 321 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 C16orf95Q9H693 158 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 SMURF1Q9HCE7 757 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 CORO2BQ9UQ03 480 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 HIF3AQ9Y2N7 669 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 PLXNB1O43157 2135 aa11.2□□□□□ -0.62
VEGFB-202ENST00000426086 ZNF816-ZNF321PA0A0X1KG74 233 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 C5orf63A6NC05 138 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 IFNL4K9M1U5 179 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 FBP2O00757 339 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 TUBG1P23258 451 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 RBM34P42696 430 aaKnown RBP11.19□□□□□ -0.62
VEGFB-202ENST00000426086 SRP9P49458 86 aaKnown RBP11.19□□□□□ -0.62
VEGFB-202ENST00000426086 STX1BP61266 288 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 EGR3Q06889 387 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 CYP51A1Q16850 503 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 C2orf68Q2NKX9 166 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 AGKQ53H12 422 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 CCDC92Q53HC0 331 aaPredicted RBP11.19□□□□□ -0.62
VEGFB-202ENST00000426086 CLEC12AQ5QGZ9 265 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 FBXW12Q6X9E4 464 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 LDLRAD3Q86YD5 345 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 OR13G1Q8NGZ3 307 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 GATAD2BQ8WXI9 593 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 TECTBQ96PL2 329 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 WDR76Q9H967 626 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 TUBG2Q9NRH3 451 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
VEGFB-202ENST00000426086 RIMS3Q9UJD0 308 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 SH3GLB1Q9Y371 365 aa11.19□□□□□ -0.62
VEGFB-202ENST00000426086 TET2Q6N021 2002 aaPredicted RBP11.19□□□□□ -0.62
VEGFB-202ENST00000426086 GMNCA6NCL1 334 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 IMPA2O14732 288 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 FAM20BO75063 409 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 IGF2P01344 180 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 NR2C1P13056 603 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 IDH3AP50213 366 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 GZMMP51124 257 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 PRB3Q04118 309 aaPredicted RBP11.18□□□□□ -0.62
VEGFB-202ENST00000426086 SCRN3Q0VDG4 424 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 COX10Q12887 443 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 MPPED2Q15777 294 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 PRAMEF6Q5VXH4 476 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 SFRP4Q6FHJ7 346 aaPredicted RBP11.18□□□□□ -0.62
VEGFB-202ENST00000426086 MED31Q9Y3C7 131 aa11.18□□□□□ -0.62
VEGFB-202ENST00000426086 TRAV27A0A087WT01 109 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 A0A1B0GWJ7 208 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 OR6C6A6NF89 314 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 IQCF6A8MYZ5 107 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 TSPAN9O75954 239 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 OPN1MWP04001 364 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 OPN1MW2P0DN77 364 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 OPN1MW3P0DN78 364 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 OR1E2P47887 323 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 RAD23AP54725 363 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 TAS2R41P59536 307 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 ARF6P62330 175 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 PATL1Q86TB9 770 aaKnown RBP11.17□□□□□ -0.62
VEGFB-202ENST00000426086 FGFRL1Q8N441 504 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 OR51A7Q8NH64 312 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 MRAPQ8TCY5 172 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 LRRC8CQ8TDW0 803 aa11.17□□□□□ -0.62
VEGFB-202ENST00000426086 SLC26A7Q8TE54 656 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms