RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 OR51S1Q8NGJ8 323 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 SLC25A44Q96H78 314 aaPredicted RBP9.54□□□□□ -0.88
CUX1-205ENST00000425244 ZMAT3Q9HA38 289 aaKnown RBP9.54□□□□□ -0.88
CUX1-205ENST00000425244 TMEM138Q9NPI0 162 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 CENPMQ9NSP4 180 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 MED29Q9NX70 200 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 VSX1Q9NZR4 365 aaPredicted RBP9.54□□□□□ -0.88
CUX1-205ENST00000425244 MED11Q9P086 117 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 NPIPA1Q9UND3 350 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 FRYQ5TBA9 3013 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 TMEM272A0A1B0GTI8 110 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 SPAARA0A1B0GVQ0 90 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 UBE2QL1A1L167 161 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 H3BML4 177 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 SLC17A2O00624 439 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 ZNF354AO60765 605 aaPredicted RBP9.54□□□□□ -0.88
CUX1-205ENST00000425244 OPN1LWP04000 364 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 CD3DP04234 171 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 CSF1P09603 554 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 MNDAP41218 407 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 EMP2P54851 167 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 POU3F1Q03052 451 aaPredicted RBP9.54□□□□□ -0.88
CUX1-205ENST00000425244 RBMS2Q15434 407 aaKnown RBP9.54□□□□□ -0.88
CUX1-205ENST00000425244 DCAF12Q5T6F0 453 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 ZNF626Q68DY1 528 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 OR10K2Q6IF99 312 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 ARSKQ6UWY0 536 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 DCXRQ7Z4W1 244 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 ZNF441Q8N8Z8 693 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 OR1J4Q8NGS1 313 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 OR13C3Q8NGS6 347 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 OR52N5Q8NH56 324 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 LRRC20Q8TCA0 184 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 MARC2Q969Z3 335 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 C5orf34Q96MH7 638 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 STRADBQ9C0K7 418 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 PIPOXQ9P0Z9 390 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 UBQLN2Q9UHD9 624 aa9.54□□□□□ -0.88
CUX1-205ENST00000425244 GPN3Q9UHW5 284 aaPredicted RBP9.54□□□□□ -0.88
CUX1-205ENST00000425244 BOD1L1Q8NFC6 3051 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 MED12Q93074 2177 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 OR2T1O43869 369 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 CRABP1P29762 137 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 MC2RQ01718 297 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 TOR2AQ5JU69 321 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 HES3Q5TGS1 186 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 GLT8D1Q68CQ7 371 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 CDH24Q86UP0 819 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 OR5M1Q8NGP8 315 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 ASB5Q8WWX0 329 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 NKD1Q969G9 470 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 RBP7Q96R05 134 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 PRRC2CQ9Y520 2896 aaKnown RBP9.53□□□□□ -0.88
CUX1-205ENST00000425244 HSPB2A8KAH6 182 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 LMX1BO60663 402 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 HTR2CP28335 458 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 RAB14P61106 215 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 HSPB2Q16082 182 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 TEX30Q5JUR7 227 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 ZNF385CQ66K41 422 aaPredicted RBP9.53□□□□□ -0.88
CUX1-205ENST00000425244 FDX2Q6P4F2 183 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 TMEM205Q6UW68 189 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 CHMP1BQ7LBR1 199 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 COMMD7Q86VX2 200 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 CATSPERDQ86XM0 798 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 WDFY1Q8IWB7 410 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 TNFAIP8L1Q8WVP5 186 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 TMEM234Q8WY98 164 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 CDC6Q99741 560 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 EMC6Q9BV81 110 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 EXO5Q9H790 373 aa9.53□□□□□ -0.88
CUX1-205ENST00000425244 PTRH2Q9Y3E5 179 aaKnown RBP9.53□□□□□ -0.88
CUX1-205ENST00000425244 LOC101059948A0A1B0GTJ6 334 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 LOC107986453A0A1B0GWG9 222 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 CIB4A0PJX0 185 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 I3L521 148 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 L7N2F9 121 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 GOSR2O14653 212 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 SMAD9O15198 467 aaKnown RBP9.52□□□□□ -0.88
CUX1-205ENST00000425244 ALOX12BO75342 701 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 STK17BO94768 372 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 GIPP09681 153 aaPredicted RBP9.52□□□□□ -0.88
CUX1-205ENST00000425244 AKAIN1P0CW23 69 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 RPS18P62269 152 aaKnown RBP9.52□□□□□ -0.88
CUX1-205ENST00000425244 ROM1Q03395 351 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 TLE3Q04726 772 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 C11orf88Q6PI97 169 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 SEZ6L2Q6UXD5 910 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 ARL6IP6Q8N6S5 226 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 THRSPQ92748 146 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 INTS12Q96CB8 462 aaKnown RBP9.52□□□□□ -0.88
CUX1-205ENST00000425244 SPSB2Q99619 263 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 TMEM185BQ9H7F4 350 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 FANCFQ9NPI8 374 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 TAS2R8Q9NYW2 309 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 GLTPQ9NZD2 209 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 COQ3Q9NZJ6 369 aa9.52□□□□□ -0.88
CUX1-205ENST00000425244 IGKV1D-43A0A0B4J1Z2 117 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 OR6C76A6NM76 312 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 M0QYG6 137 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms