RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SH3BGRL2Q9UJC5 107 aa9.05□□□□□ -0.96
MDC1-205ENST00000425072 ESPL1Q14674 2120 aa9.05□□□□□ -0.96
MDC1-205ENST00000425072 A0A096LPE4 126 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 TMEM269A0A1B0GVZ9 245 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 A0A1W2PPZ6 126 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 CCDC160A6NGH7 325 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 B8ZZF3 427 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 H3BSA7 217 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 ZNF701M0R085 212 aaPredicted RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 PSMD9O00233 223 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 WNT11O96014 354 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 HLA-DPB1P04440 258 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 ITGA5P08648 1049 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 CD79AP11912 226 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 ZNF32P17041 273 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 COX5AP20674 150 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 BMP5P22003 454 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 GALP22466 123 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 OPRL1P41146 370 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 TPTEP56180 551 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 PSG4Q00888 419 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 ALKBH1Q13686 389 aaKnown RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 RAB35Q15286 201 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 TSTQ16762 297 aaKnown RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 LIPKQ5VXJ0 399 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 DMKNQ6E0U4 476 aaPredicted RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 BHLHA15Q7RTS1 189 aaPredicted RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 ANKRD13BQ86YJ7 626 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 CLVS1Q8IUQ0 354 aaPredicted RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 PHC2Q8IXK0 858 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 RPRMLQ8N4K4 120 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 NAXEQ8NCW5 288 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 OR1J2Q8NGS2 313 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 OR1F12Q8NHA8 337 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 YIPF6Q96EC8 236 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 OPALINQ96PE5 141 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 DCLRE1CQ96SD1 692 aaKnown RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 AMELYQ99218 206 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 ATF6BQ99941 703 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 FUNDC2Q9BWH2 189 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 OR2H1Q9GZK4 316 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 OPN3Q9H1Y3 402 aaPredicted RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 OR10A4Q9H209 315 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 DDX28Q9NUL7 540 aaKnown RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 ATPIF1Q9UII2 106 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 ERRFI1Q9UJM3 462 aaPredicted RBP9.04□□□□□ -0.96
MDC1-205ENST00000425072 SSR3Q9UNL2 185 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 SLC5A6Q9Y289 635 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 GSTK1Q9Y2Q3 226 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 KLHDC2Q9Y2U9 406 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 LRP12Q9Y561 859 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 TEX15Q9BXT5 2789 aa9.04□□□□□ -0.96
MDC1-205ENST00000425072 COL6A6A6NMZ7 2263 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 ABCA12Q86UK0 2595 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 OR6C6A6NF89 314 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 TMEM212A6NML5 194 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 MAGEB4O15481 346 aaPredicted RBP9.03□□□□□ -0.96
MDC1-205ENST00000425072 MMP7P09237 267 aaPredicted RBP9.03□□□□□ -0.96
MDC1-205ENST00000425072 PSMB1P20618 241 aaKnown RBP9.03□□□□□ -0.96
MDC1-205ENST00000425072 IL32P24001 234 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 GABRA5P31644 462 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 LIPAP38571 399 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 FOXG1P55316 489 aaPredicted RBP9.03□□□□□ -0.96
MDC1-205ENST00000425072 GALK2Q01415 458 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 MRPL49Q13405 166 aaKnown RBP9.03□□□□□ -0.96
MDC1-205ENST00000425072 TBRG1Q3YBR2 411 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 CCDC92Q53HC0 331 aaPredicted RBP9.03□□□□□ -0.96
MDC1-205ENST00000425072 TMEM244Q5VVB8 128 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 GPR107Q5VW38 600 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 OTPQ5XKR4 325 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 ARL9Q6T311 187 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 DRAM2Q6UX65 266 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 PAMR1Q6UXH9 720 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 ZNF704Q6ZNC4 412 aaPredicted RBP9.03□□□□□ -0.96
MDC1-205ENST00000425072 CFAP77Q6ZQR2 320 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 SPATC1Q76KD6 591 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 CXorf67Q86X51 503 aaPredicted RBP9.03□□□□□ -0.96
MDC1-205ENST00000425072 ZNF283Q8N7M2 679 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 IL17RDQ8NFM7 739 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 OR2G2Q8NGZ5 317 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 OR5AK2Q8NH90 309 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 RAB2BQ8WUD1 216 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 PHYHIPQ92561 330 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 THRSPQ92748 146 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 GHSRQ92847 366 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 ITFG2Q969R8 447 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 MUCL1Q96DR8 90 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 COMMD4Q9H0A8 199 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 B3GNT2Q9NY97 397 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 JKAMPQ9P055 326 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 ZNF281Q9Y2X9 895 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 AMDHD2Q9Y303 409 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 R4GMQ9 66 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 CFAP46Q8IYW2 2715 aa9.03□□□□□ -0.96
MDC1-205ENST00000425072 MYO9AB2RTY4 2548 aa9.02□□□□□ -0.96
MDC1-205ENST00000425072 OR5H1A6NKK0 313 aa9.02□□□□□ -0.97
MDC1-205ENST00000425072 E9PI62 339 aa9.02□□□□□ -0.97
MDC1-205ENST00000425072 F5H5K5 113 aa9.02□□□□□ -0.97
MDC1-205ENST00000425072 LOC110117498-PIK3R3F6TDL0 507 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms