RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 NAA10P41227 235 aaPredicted RBP12.75□□□□□ -0.37
TMEM248-204ENST00000424964 PRRC2AP48634 2157 aaKnown RBP12.75□□□□□ -0.37
TMEM248-204ENST00000424964 PTH2RP49190 550 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 ATP5J2P56134 94 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 PPP1CBP62140 327 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 MSMPQ1L6U9 139 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 SWI5Q1ZZU3 235 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 ZNF718Q3SXZ3 478 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 SPATA46Q5T0L3 261 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 AADACL4Q5VUY2 407 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 NXNL2Q5VZ03 156 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 SPATC1Q76KD6 591 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 GID4Q8IVV7 300 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 OR8J1Q8NGP2 316 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 SYNPRQ8TBG9 265 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 DCLRE1CQ96SD1 692 aaKnown RBP12.75□□□□□ -0.37
TMEM248-204ENST00000424964 MRPL37Q9BZE1 423 aaKnown RBP12.75□□□□□ -0.37
TMEM248-204ENST00000424964 GSX2Q9BZM3 304 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 PNRC2Q9NPJ4 139 aaKnown RBP12.75□□□□□ -0.37
TMEM248-204ENST00000424964 C8orf4Q9NR00 106 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 ZNF701Q9NV72 531 aaPredicted RBP12.75□□□□□ -0.37
TMEM248-204ENST00000424964 TBCCD1Q9NVR7 557 aa12.75□□□□□ -0.37
TMEM248-204ENST00000424964 TMEM129A0AVI4 362 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 SLC22A31A6NKX4 558 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 MRPL3P09001 348 aaKnown RBP12.74□□□□□ -0.37
TMEM248-204ENST00000424964 GCH1P30793 250 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 TPTEP56180 551 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 RFPL4BQ6ZWI9 263 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 C1orf174Q8IYL3 243 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 LRRC75A-AS1Q8N1F1 130 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 ZNF555Q8NEP9 628 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 OR10S1Q8NGN2 331 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 SLC25A40Q8TBP6 338 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 THEM6Q8WUY1 208 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
TMEM248-204ENST00000424964 UBE2FQ969M7 185 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 SPTSSAQ969W0 71 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 DOK1Q99704 481 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 COPS4Q9BT78 406 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 ABHD6Q9BV23 337 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 DYNLRB1Q9NP97 96 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 FAM118AQ9NWS6 357 aa12.74□□□□□ -0.37
TMEM248-204ENST00000424964 SMPD3Q9NY59 655 aaPredicted RBP12.74□□□□□ -0.37
TMEM248-204ENST00000424964 LOC100130705A0A1B0GUX0 176 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 A0A1W2PPW3 197 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 ZNF878C9JN71 531 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 CLPTM1O96005 669 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 ZNF250P15622 560 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 EVX1P49640 407 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 RGS6P49758 472 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 HCCSP53701 268 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
TMEM248-204ENST00000424964 RSPO1Q2MKA7 263 aaPredicted RBP12.73□□□□□ -0.37
TMEM248-204ENST00000424964 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 PACRGLQ8N7B6 248 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 ZNF454Q8N9F8 522 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 OTOSQ8NHW6 89 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 ST7LQ8TDW4 575 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 IPCEF1Q8WWN9 437 aaPredicted RBP12.73□□□□□ -0.37
TMEM248-204ENST00000424964 RDH12Q96NR8 316 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 VRK1Q99986 396 aaPredicted RBP12.73□□□□□ -0.37
TMEM248-204ENST00000424964 OR2J1Q9GZK6 312 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 DDX28Q9NUL7 540 aaKnown RBP12.73□□□□□ -0.37
TMEM248-204ENST00000424964 DNAJC27Q9NZQ0 273 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 NKX1-2Q9UD57 310 aaPredicted RBP12.73□□□□□ -0.37
TMEM248-204ENST00000424964 LAMP5Q9UJQ1 280 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 FBXO9Q9UK97 447 aaPredicted RBP12.73□□□□□ -0.37
TMEM248-204ENST00000424964 STARD10Q9Y365 291 aa12.73□□□□□ -0.37
TMEM248-204ENST00000424964 E9PQ18 207 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 M0R135 149 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 CASQ2O14958 399 aaPredicted RBP12.72□□□□□ -0.37
TMEM248-204ENST00000424964 ICMTO60725 284 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 NDUFS7O75251 213 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 LCATP04180 440 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 LYNP07948 512 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 ACSM4P0C7M7 580 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 PAX1P15863 534 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 SLC15A1P46059 708 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 SLC6A9P48067 706 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 PRKXP51817 358 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 NUDT6P53370 316 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 SLC34A1Q06495 639 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 NKPD1Q17RQ9 610 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 KRTAP27-1Q3LI81 207 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 OGFRL1Q5TC84 451 aaPredicted RBP12.72□□□□□ -0.37
TMEM248-204ENST00000424964 NAA40Q86UY6 237 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 OR5L1Q8NGL2 311 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 KLF14Q8TD94 323 aaPredicted RBP12.72□□□□□ -0.37
TMEM248-204ENST00000424964 RFKQ969G6 155 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 APOBEC3DQ96AK3 386 aaPredicted RBP12.72□□□□□ -0.37
TMEM248-204ENST00000424964 ZNF799Q96GE5 643 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 MARS2Q96GW9 593 aaKnown RBP12.72□□□□□ -0.37
TMEM248-204ENST00000424964 COG8Q96MW5 612 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 ZNF582Q96NG8 517 aaPredicted RBP12.72□□□□□ -0.37
TMEM248-204ENST00000424964 CNN2Q99439 309 aaKnown RBP12.72□□□□□ -0.37
TMEM248-204ENST00000424964 KCNJ15Q99712 375 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 YIPF3Q9GZM5 350 aa12.72□□□□□ -0.37
TMEM248-204ENST00000424964 CXXC4Q9H2H0 198 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms