RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CTLA4P16410 223 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 FNTBP49356 437 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 PNLIPRP2P54317 469 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 SLC26A5P58743 744 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 EIF5AP63241 154 aaKnown RBP13.62□□□□□ -0.23
C9orf3-204ENST00000424143 ODF4Q2M2E3 257 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 CDNFQ49AH0 187 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 SLC35D2Q76EJ3 337 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 GRINAQ7Z429 371 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 SKA3Q8IX90 412 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 BAP18Q8IXM2 172 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 SLC22A24Q8N4F4 322 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 PAQR4Q8N4S7 273 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-204ENST00000424143 DMBX1Q8NFW5 382 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 SLC26A10Q8NG04 563 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 OR4K17Q8NGC6 315 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 ST7LQ8TDW4 575 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 NARS2Q96I59 477 aaKnown RBP13.62□□□□□ -0.23
C9orf3-204ENST00000424143 RAB18Q9NP72 206 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 SLC39A1Q9NY26 324 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 DNAJB11Q9UBS4 358 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 CGGBP1Q9UFW8 167 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-204ENST00000424143 FBXO4Q9UKT5 387 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 SLC5A6Q9Y289 635 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 BRCA2P51587 3418 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 SNAPINO95295 136 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 GPANK1O95872 356 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 ERCC1P07992 297 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-204ENST00000424143 PAX6P26367 422 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 RPS27P42677 84 aaKnown RBP13.61□□□□□ -0.23
C9orf3-204ENST00000424143 BLKP51451 505 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 B2MP61769 119 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 KCNAB1Q14722 419 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 DEFB110Q30KQ9 67 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 MOGAT2Q3SYC2 334 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 SCGB2B2Q4G0G5 96 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 NKAPLQ5M9Q1 402 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 C1orf140Q5VVS0 124 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 PARM1Q6UWI2 310 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 TRAPPC6BQ86SZ2 158 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 TMEM151BQ8IW70 566 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 PUSL1Q8N0Z8 303 aaKnown RBP13.61□□□□□ -0.23
C9orf3-204ENST00000424143 ARRDC1Q8N5I2 433 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 OR13H1Q8NG92 308 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 RNF133Q8WVZ7 376 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 MVB12AQ96EY5 273 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 CNTNAP3BQ96NU0 1288 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 ELF4Q99607 663 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-204ENST00000424143 CHMP1AQ9HD42 196 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-204ENST00000424143 MBD2Q9UBB5 411 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 KIF26BQ2KJY2 2108 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 SPTY2D1-AS1A0A0U1RR47 76 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 TMEM235A6NFC5 223 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 WIPF3A6NGB9 483 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 LILRA5A6NI73 299 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 OR6C76A6NM76 312 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 TMEM14DPA8MWL7 114 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 TMEM150CB9EJG8 249 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 HCRTR2O43614 444 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 ICOSLGO75144 302 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 DDAH2O95865 285 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 FCER2P06734 321 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF823P16415 610 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 DRD1P21728 446 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 RFC3P40938 356 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 ERV3-1Q14264 604 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 ELAVL1Q15717 326 aaKnown RBP13.61□□□□□ -0.23
C9orf3-204ENST00000424143 GUCA2BQ16661 112 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 LDLRAD3Q86YD5 345 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 MISPQ8IVT2 679 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 SLC22A18ASQ8N1D0 253 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 JAGN1Q8N5M9 183 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 OR4D6Q8NGJ1 314 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 OR51A2Q8NGJ7 313 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF721Q8TF20 911 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 FGF14Q92915 247 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 MMABQ96EY8 250 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-204ENST00000424143 RNF126Q9BV68 326 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 FANCFQ9NPI8 374 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 BIN3Q9NQY0 253 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 CYTL1Q9NRR1 136 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 FARSAQ9Y285 508 aaKnown RBP13.61□□□□□ -0.23
C9orf3-204ENST00000424143 POMT1Q9Y6A1 747 aa13.61□□□□□ -0.23
C9orf3-204ENST00000424143 DCDC2BA2VCK2 349 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF98A6NK75 572 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 FTCDNL1E5RQL4 147 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 AHSA1O95433 338 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 IGLV3-19P01714 112 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 IFNA4P05014 189 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 DCNP07585 359 aaKnown RBP13.6□□□□□ -0.23
C9orf3-204ENST00000424143 CD1CP29017 333 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 CBX5P45973 191 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 FASLGP48023 281 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 DAP3P51398 398 aaKnown RBP13.6□□□□□ -0.23
C9orf3-204ENST00000424143 PJVKQ0ZLH3 352 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 TMEM128Q5BJH2 165 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 HAGHLQ6PII5 290 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-204ENST00000424143 RHOUQ7L0Q8 258 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms