RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FAM46AQ96IP4 442 aaKnown RBP13.59□□□□□ -0.23
COL18A1-205ENST00000423214 DUX5Q96PT3 197 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 SIGLEC11Q96RL6 698 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 SYT4Q9H2B2 425 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 ANKRD19PQ9H560 264 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 PTTG3PQ9NZH4 202 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 ZNF69Q9UC07 566 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 ATPIF1Q9UII2 106 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 INSIG2Q9Y5U4 225 aa13.59□□□□□ -0.23
COL18A1-205ENST00000423214 TRAPPC2LH3BP13 241 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 NDUFAB1O14561 156 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 WIPF1O43516 503 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 KHDRBS3O75525 346 aaKnown RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 RAC2P15153 192 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 RPS2P15880 293 aaKnown RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 PRTN3P24158 256 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 RBMXP38159 391 aaKnown RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 ERFP50548 548 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 LSM6P62312 80 aaKnown RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 BAMBIQ13145 260 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 OTPQ5XKR4 325 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 GPR139Q6DWJ6 353 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 SLC27A4Q6P1M0 643 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 TSEN54Q7Z6J9 526 aaKnown RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 ADCK1Q86TW2 530 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 OR10AD1Q8NGE0 317 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 OR5L1Q8NGL2 311 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 OR1F12Q8NHA8 337 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 PTP4A1Q93096 173 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 SSBP3Q9BWW4 388 aaPredicted RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 MS4A7Q9GZW8 240 aaPredicted RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 SPAG4Q9NPE6 437 aa13.58□□□□□ -0.24
COL18A1-205ENST00000423214 KRCC1Q9NPI7 259 aaPredicted RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 COA3Q9Y2R0 106 aaPredicted RBP13.58□□□□□ -0.24
COL18A1-205ENST00000423214 OR6C6A6NF89 314 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 CEACAM18A8MTB9 384 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 TMEM178BH3BS89 294 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 SOCS2O14508 198 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 MSX2P35548 267 aaPredicted RBP13.57□□□□□ -0.24
COL18A1-205ENST00000423214 SRP9P49458 86 aaKnown RBP13.57□□□□□ -0.24
COL18A1-205ENST00000423214 GNB2P62879 340 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 KLF17Q5JT82 389 aaPredicted RBP13.57□□□□□ -0.24
COL18A1-205ENST00000423214 PGM2L1Q6PCE3 622 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 DNM1P34Q6PK57 102 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 BTNL3Q6UXE8 466 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 PIGWQ7Z7B1 504 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.57□□□□□ -0.24
COL18A1-205ENST00000423214 SLC25A28Q96A46 364 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 ZNF747Q9BV97 191 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 HDHD2Q9H0R4 259 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 NMNAT1Q9HAN9 279 aaPredicted RBP13.57□□□□□ -0.24
COL18A1-205ENST00000423214 GCM1Q9NP62 436 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 ARL8BQ9NVJ2 186 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 IL20RAQ9UHF4 553 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 AURKCQ9UQB9 309 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 ARL2BPQ9Y2Y0 163 aa13.57□□□□□ -0.24
COL18A1-205ENST00000423214 RER1O15258 196 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 TMPRSS2O15393 492 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 H1F0P07305 194 aaKnown RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 DBHP09172 617 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 ZNF26P17031 533 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 CENPAP49450 140 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 RPS6KA3P51812 740 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 HLXQ14774 488 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 CCDC92Q53HC0 331 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 OR2T2Q6IF00 324 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 FBXW12Q6X9E4 464 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 C1orf87Q8N0U7 546 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 PARP8Q8N3A8 854 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 FAM86B1Q8N7N1 296 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 BHLHE23Q8NDY6 225 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 OR8G5Q8NG78 346 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 OR52E2Q8NGJ4 325 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 OR13G1Q8NGZ3 307 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 ZNF420Q8TAQ5 688 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 SLC7A13Q8TCU3 470 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 APOBEC3DQ96AK3 386 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 RSRC1Q96IZ7 334 aaKnown RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 PLEKHA8Q96JA3 519 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 MEGF10Q96KG7 1140 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 ZNF582Q96NG8 517 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 GPX7Q96SL4 187 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 NRIP3Q9NQ35 241 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 VSX1Q9NZR4 365 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 RPS6KA6Q9UK32 745 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 SIGLEC7Q9Y286 467 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 FAM32AQ9Y421 112 aaKnown RBP13.56□□□□□ -0.24
COL18A1-205ENST00000423214 ENPP4Q9Y6X5 453 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 V9GYQ6 96 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 PKD1L1Q8TDX9 2849 aa13.56□□□□□ -0.24
COL18A1-205ENST00000423214 LRRC30A6NM36 301 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 DIRAS1O95057 198 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 CYB5R3P00387 301 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-205ENST00000423214 CRABP1P29762 137 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 MTNR1AP48039 350 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 BCL6BQ8N143 479 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-205ENST00000423214 OR8B3Q8NGG8 313 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 OR8B2Q96RD0 313 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 CDRT15Q96T59 188 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms