RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CHST4Q8NCG5 386 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 SMRP1Q8NCR6 262 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 OR6K3Q8NGY3 331 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 NUDCD2Q8WVJ2 157 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 FOXQ1Q9C009 403 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 PTGES2Q9H7Z7 377 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 TRIM77I1YAP6 450 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 ADAM10O14672 748 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 OPN1LWP04000 364 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 TAF13Q15543 124 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 ARSKQ6UWY0 536 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 OVCH2Q7RTZ1 564 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 FJX1Q86VR8 437 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 ZNF584Q8IVC4 421 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 TSTD1Q8NFU3 115 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 OR52N4Q8NGI2 321 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 MRGPRFQ96AM1 343 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 ZNF75AQ96N20 296 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 SPACA5Q96QH8 159 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 PDCD10Q9BUL8 212 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 TMEM185BQ9H7F4 350 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 MED9Q9NWA0 146 aa14.11□□□□□ -0.15
CDH1-202ENST00000422392 GDF2Q9UK05 429 aaPredicted RBP14.11□□□□□ -0.15
CDH1-202ENST00000422392 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.1□□□□□ -0.15
CDH1-202ENST00000422392 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.1□□□□□ -0.15
CDH1-202ENST00000422392 A0A1W2PR77 199 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 FAM25EA8MYX2 175 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 NPIPA5E9PKD4 350 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 SULT1C2O00338 296 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 TO15178 435 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 CD34P28906 385 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 HSD11B2P80365 405 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 RHOUQ7L0Q8 258 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 PAQR4Q8N4S7 273 aaPredicted RBP14.1□□□□□ -0.15
CDH1-202ENST00000422392 ZNF248Q8NDW4 579 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 OR5M8Q8NGP6 311 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 ASB10Q8WXI3 467 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 ST8SIA2Q92186 375 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 SLC25A21Q9BQT8 299 aaPredicted RBP14.1□□□□□ -0.15
CDH1-202ENST00000422392 UCK1Q9HA47 277 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 SUSD2Q9UGT4 822 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 NPIPA1Q9UND3 350 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 PLEKHA6Q9Y2H5 1048 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 RHBDD3Q9Y3P4 386 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 HRH3Q9Y5N1 445 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 AQP8O94778 261 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 IGHMP01871 453 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 ARHGDIBP52566 201 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 CXADRP78310 365 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 UNC119Q13432 240 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 C14orf28Q4W4Y0 310 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 ATRAIDQ6UW56 229 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 TRAPPC6BQ86SZ2 158 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.1□□□□□ -0.15
CDH1-202ENST00000422392 BOLLQ8N9W6 283 aaKnown RBP14.1□□□□□ -0.15
CDH1-202ENST00000422392 MICU1Q9BPX6 476 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 EML6Q6ZMW3 1958 aa14.1□□□□□ -0.15
CDH1-202ENST00000422392 CEP192Q8TEP8 1941 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 RAB27BO00194 218 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 HPP00738 406 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 MELTFP08582 738 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 H2BFMP0C1H6 154 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 AVPR2P30518 371 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 PPP1R1AQ13522 171 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 C17orf82Q86X59 251 aaPredicted RBP14.09□□□□□ -0.15
CDH1-202ENST00000422392 ZNF441Q8N8Z8 693 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 ADAT3Q96EY9 351 aaPredicted RBP14.09□□□□□ -0.15
CDH1-202ENST00000422392 CST11Q9H112 138 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 SCPEP1Q9HB40 452 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 OR14I1A6ND48 311 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 KRBOX1C9JBD0 128 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 D6RAR5 112 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 OR2T1O43869 369 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 CD74P04233 296 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 GNB3P16520 340 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 LUMP51884 338 aaPredicted RBP14.09□□□□□ -0.15
CDH1-202ENST00000422392 CAPZA1P52907 286 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 ATP1B3P54709 279 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 BAMBIQ13145 260 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 TOMM20Q15388 145 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 DMRTC1Q5HYR2 192 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 CFAP77Q6ZQR2 320 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 LYPD6Q86Y78 171 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 PPP1R1CQ8WVI7 109 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 ZBTB8AQ96BR9 441 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 C12orf4Q9NQ89 552 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 PRELID1Q9Y255 219 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 SLC5A6Q9Y289 635 aa14.09□□□□□ -0.15
CDH1-202ENST00000422392 SNAPC5O75971 98 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 APOC3P02656 99 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 ZNF260Q3ZCT1 412 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 ELP2Q6IA86 826 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 OR10K1Q8NGX5 313 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 LHFPL5Q8TAF8 219 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 CASTOR1Q8WTX7 329 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 MRPS24Q96EL2 167 aaKnown RBP14.08□□□□□ -0.16
CDH1-202ENST00000422392 C5orf34Q96MH7 638 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 KCNK17Q96T54 332 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 SOX7Q9BT81 388 aa14.08□□□□□ -0.16
CDH1-202ENST00000422392 NCOA6Q14686 2063 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms